RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 GULP1Q9UBP9 304 aa13.15□□□□□ -0.3
DDX41-204ENST00000504807 IP6K2Q9UHH9 426 aa13.15□□□□□ -0.3
DDX41-204ENST00000504807 LUC7L2Q9Y383 392 aaKnown RBP13.15□□□□□ -0.3
DDX41-204ENST00000504807 PCYT1BQ9Y5K3 369 aaPredicted RBP13.15□□□□□ -0.3
DDX41-204ENST00000504807 BZW2Q9Y6E2 419 aaKnown RBP13.15□□□□□ -0.3
DDX41-204ENST00000504807 RP1P56715 2156 aa13.15□□□□□ -0.3
DDX41-204ENST00000504807 CENPEQ02224 2701 aa13.15□□□□□ -0.3
DDX41-204ENST00000504807 ITPR3Q14573 2671 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 CLEC18AA5D8T8 446 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 CFAP69A5D8W1 941 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 TOR1BO14657 336 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 EFSO43281 561 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 NOBOXO60393 691 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 PROSCO94903 275 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 RASGRP1O95267 797 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 PGLSO95336 258 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 VIPR1P32241 457 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 MMP13P45452 471 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 ZNF135P52742 658 aaPredicted RBP13.14□□□□□ -0.31
DDX41-204ENST00000504807 CCL7P80098 99 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 DSC2Q02487 901 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 NIPAL4Q0D2K0 466 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 GALNT2Q10471 571 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 ACOX1Q15067 660 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 PAFAH1B3Q15102 231 aaKnown RBP13.14□□□□□ -0.31
DDX41-204ENST00000504807 CLEC18BQ6UXF7 455 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 Q6ZVL8 140 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 USP53Q70EK8 1073 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 FAM26EQ8N5C1 309 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 ATPAF2Q8N5M1 289 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 ARL10Q8N8L6 244 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 CLEC18CQ8NCF0 446 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 GPR156Q8NFN8 814 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 OR56A4Q8NGH8 313 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 ARRDC2Q8TBH0 407 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 RAPGEF5Q92565 580 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 MAML1Q92585 1016 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 FAF2Q96CS3 445 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 MCCC1Q96RQ3 725 aaPredicted RBP13.14□□□□□ -0.31
DDX41-204ENST00000504807 CCNL2Q96S94 520 aaPredicted RBP13.14□□□□□ -0.31
DDX41-204ENST00000504807 AGAP2Q99490 1192 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 CHP1Q99653 195 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 ABCG4Q9H172 646 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 LRRC4CQ9HCJ2 640 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 NT5MQ9NPB1 228 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 DONSONQ9NYP3 566 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 CD84Q9UIB8 345 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 GPR34Q9UPC5 381 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 PLEKHM1Q9Y4G2 1056 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 DGKBQ9Y6T7 804 aa13.14□□□□□ -0.31
DDX41-204ENST00000504807 C3orf70A6NLC5 250 aaPredicted RBP13.13□□□□□ -0.31
DDX41-204ENST00000504807 SOCS5O75159 536 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 PRLP01236 227 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 CEACAM5P06731 702 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 GARSP41250 739 aaKnown RBP13.13□□□□□ -0.31
DDX41-204ENST00000504807 POLD2P49005 469 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 SKOR1P84550 965 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 KRT81Q14533 505 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 ANKRD20A8PQ5CZ79 823 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 MARC1Q5VT66 337 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 FOXR1Q6PIV2 292 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 OGFOD3Q6PK18 319 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 XKR5Q6UX68 686 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 TECPR1Q7Z6L1 1165 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 TRIM74Q86UV6 250 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 HEATR4Q86WZ0 1026 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 SDR16C5Q8N3Y7 309 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 FSTL5Q8N475 847 aaPredicted RBP13.13□□□□□ -0.31
DDX41-204ENST00000504807 NUS1Q96E22 293 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 DTD2Q96FN9 168 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 LIN37Q96GY3 246 aaPredicted RBP13.13□□□□□ -0.31
DDX41-204ENST00000504807 SLC46A1Q96NT5 459 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 DNAJC7Q99615 494 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 SEMA3CQ99985 751 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 TEX101Q9BY14 249 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 FOXP3Q9BZS1 431 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 BRD8Q9H0E9 1235 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 SUDS3Q9H7L9 328 aaPredicted RBP13.13□□□□□ -0.31
DDX41-204ENST00000504807 CYP4F12Q9HCS2 524 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 SPATS2LQ9NUQ6 558 aaKnown RBP13.13□□□□□ -0.31
DDX41-204ENST00000504807 SPTLC3Q9NUV7 552 aa13.13□□□□□ -0.31
DDX41-204ENST00000504807 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.13□□□□□ -0.31
DDX41-204ENST00000504807 ATXN7L1Q9ULK2 861 aaPredicted RBP13.13□□□□□ -0.31
DDX41-204ENST00000504807 LRBAP50851 2863 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 KIF26BQ2KJY2 2108 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.12□□□□□ -0.31
DDX41-204ENST00000504807 TMEM110-MUSTN1A8MSY1 372 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 GOLGA6L19H0YKK7 550 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 MYO1FO00160 1098 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 AGRPO00253 132 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 HLA-DQB2P05538 268 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 MMP2P08253 660 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 CTSEP14091 401 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 HGFP14210 728 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 AK4P27144 223 aaPredicted RBP13.12□□□□□ -0.31
DDX41-204ENST00000504807 SSR1P43307 286 aaKnown RBP13.12□□□□□ -0.31
DDX41-204ENST00000504807 RENBPP51606 427 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 MAZP56270 477 aaKnown RBP13.12□□□□□ -0.31
DDX41-204ENST00000504807 RIPPLY3P57055 190 aa13.12□□□□□ -0.31
DDX41-204ENST00000504807 PTSQ03393 145 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms