RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 SCAMP4Q969E2 229 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 FATE1Q969F0 183 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 OLFM3Q96PB7 478 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 MCCC1Q96RQ3 725 aaPredicted RBP14.24□□□□□ -0.13
HOXC9-202ENST00000504557 LACRTQ9GZZ8 138 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 BRD8Q9H0E9 1235 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 PHPT1Q9NRX4 125 aaPredicted RBP14.24□□□□□ -0.13
HOXC9-202ENST00000504557 AMACRQ9UHK6 382 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 U3KQA8 63 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 ACACAQ13085 2346 aa14.24□□□□□ -0.13
HOXC9-202ENST00000504557 hCG_1818297A0A087WSY0 165 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 C1orf232A0A0U1RR37 186 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 TMEM8BA6NDV4 472 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 CAPN8A6NHC0 703 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 B4DGG1 531 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 LMO7DNF2Z398 122 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 INPP4BO15327 924 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 PMPCBO75439 489 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 PRLP01236 227 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 MYCLP1P12525 358 aaPredicted RBP14.23□□□□□ -0.13
HOXC9-202ENST00000504557 KELP23276 732 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 GNPDA1P46926 289 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 POLD2P49005 469 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 E2F1Q01094 437 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 PTSQ03393 145 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 ILKQ13418 452 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 PERM1Q5SV97 790 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 C6orf132Q5T0Z8 1188 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 ALG1LQ6GMV1 187 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 NT5DC3Q86UY8 548 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 GKN2Q86XP6 184 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 FAM181AQ8N9Y4 354 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 KDF1Q8NAX2 398 aaPredicted RBP14.23□□□□□ -0.13
HOXC9-202ENST00000504557 KYQ8NBH2 561 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 SPATA22Q8NHS9 363 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 CCL4L1Q8NHW4 92 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 TFB1MQ8WVM0 346 aaKnown RBP14.23□□□□□ -0.13
HOXC9-202ENST00000504557 SCG3Q8WXD2 468 aaKnown RBP14.23□□□□□ -0.13
HOXC9-202ENST00000504557 AP2M1Q96CW1 435 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 RBM41Q96IZ5 413 aaKnown RBP14.23□□□□□ -0.13
HOXC9-202ENST00000504557 TMEM168Q9H0V1 697 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 ABCG8Q9H221 673 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 C10orf88Q9H8K7 445 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 CARS2Q9HA77 564 aaKnown RBP14.23□□□□□ -0.13
HOXC9-202ENST00000504557 TRIM10Q9UDY6 481 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 GPR34Q9UPC5 381 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 CLCA2Q9UQC9 943 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 AK5Q9Y6K8 562 aa14.23□□□□□ -0.13
HOXC9-202ENST00000504557 SCN8AQ9UQD0 1980 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 A0A0U1RQJ8 604 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 PRSS38A1L453 326 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 PSMD11O00231 422 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 TPP1O14773 563 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 CASC3O15234 703 aaKnown RBP14.22□□□□□ -0.13
HOXC9-202ENST00000504557 OPA1O60313 960 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 MT-CYBP00156 380 aaPredicted RBP14.22□□□□□ -0.13
HOXC9-202ENST00000504557 MT-CO3P00414 261 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 CDK4P11802 303 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 TGM2P21980 687 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 FECHP22830 423 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 PTPN3P26045 913 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 RPIAP49247 311 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 VAV2P52735 878 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 CDK3Q00526 305 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 QPCTQ16769 361 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 MARK2Q7KZI7 788 aaKnown RBP14.22□□□□□ -0.13
HOXC9-202ENST00000504557 BZW1Q7L1Q6 419 aaKnown RBP14.22□□□□□ -0.13
HOXC9-202ENST00000504557 SFTPA2Q8IWL1 248 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 PDCD7Q8N8D1 485 aaKnown RBP14.22□□□□□ -0.13
HOXC9-202ENST00000504557 FAM46DQ8NEK8 389 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 KIAA1524Q8TCG1 905 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 PTCD2Q8WV60 388 aaKnown RBP14.22□□□□□ -0.13
HOXC9-202ENST00000504557 SPOCK2Q92563 424 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 AGAP2Q99490 1192 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 FAM118BQ9BPY3 351 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 MLPHQ9BV36 600 aaPredicted RBP14.22□□□□□ -0.13
HOXC9-202ENST00000504557 RIOK2Q9BVS4 552 aaKnown RBP14.22□□□□□ -0.13
HOXC9-202ENST00000504557 BOCQ9BWV1 1114 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 ADGRE3Q9BY15 652 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 KLHL8Q9P2G9 620 aaPredicted RBP14.22□□□□□ -0.13
HOXC9-202ENST00000504557 PADI4Q9UM07 663 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 SHOC2Q9UQ13 582 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 TMEM98Q9Y2Y6 226 aa14.22□□□□□ -0.13
HOXC9-202ENST00000504557 SRRM3A6NNA2 597 aaPredicted RBP14.21□□□□□ -0.13
HOXC9-202ENST00000504557 GOLGA6L6A8MZA4 724 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 H7C0C1 242 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 TAF4O00268 1085 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 PDE2AO00408 941 aaPredicted RBP14.21□□□□□ -0.13
HOXC9-202ENST00000504557 ASMTLO95671 621 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 PTMAP06454 111 aaKnown RBP14.21□□□□□ -0.13
HOXC9-202ENST00000504557 ZNF30P17039 623 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 TRIM23P36406 574 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 ATP5OP48047 213 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 NR2C2P49116 596 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 STC1P52823 247 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 CAMK2BQ13554 666 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 PRKD1Q15139 912 aaPredicted RBP14.21□□□□□ -0.13
HOXC9-202ENST00000504557 TEX44Q53QW1 395 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 ALS2CLQ60I27 953 aa14.21□□□□□ -0.13
HOXC9-202ENST00000504557 AADACL2Q6P093 401 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms