RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 GFM1Q96RP9 751 aaKnown RBP11.95□□□□□ -0.5
MED28-203ENST00000503945 PACSIN1Q9BY11 444 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 TEX101Q9BY14 249 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 TSPY26PQ9H489 355 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 SYNDIG1Q9H7V2 258 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 NHEJ1Q9H9Q4 299 aaPredicted RBP11.95□□□□□ -0.5
MED28-203ENST00000503945 THSD1Q9NS62 852 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 GOLGA6AQ9NYA3 693 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 NENFQ9UMX5 172 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 SATB2Q9UPW6 733 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 ENTPD2Q9Y5L3 495 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 ATMQ13315 3056 aa11.95□□□□□ -0.5
MED28-203ENST00000503945 COL27A1Q8IZC6 1860 aaPredicted RBP11.95□□□□□ -0.5
MED28-203ENST00000503945 NPIPB15A6NHN6 443 aaPredicted RBP11.94□□□□□ -0.5
MED28-203ENST00000503945 ERVH48-1M5A8F1 160 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 ZW10O43264 779 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 PNLIPP16233 465 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 GLB1P16278 677 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 MAN1A1P33908 653 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 GPR1P46091 355 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 CCL7P80098 99 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 PTSQ03393 145 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 DPTQ07507 201 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 TAF1BQ53T94 588 aaPredicted RBP11.94□□□□□ -0.5
MED28-203ENST00000503945 C3orf38Q5JPI3 329 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 BROXQ5VW32 411 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 NCBP2-AS2Q69YL0 99 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 NYAP1Q6ZVC0 841 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 TECPR1Q7Z6L1 1165 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 NLRP8Q86W28 1048 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 VSTM4Q8IW00 320 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 Q8N9G6 341 aaPredicted RBP11.94□□□□□ -0.5
MED28-203ENST00000503945 GPR156Q8NFN8 814 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.94□□□□□ -0.5
MED28-203ENST00000503945 RAPGEF5Q92565 580 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 MAML1Q92585 1016 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 CCDC74AQ96AQ1 378 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 AP2M1Q96CW1 435 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 CCDC97Q96F63 343 aaPredicted RBP11.94□□□□□ -0.5
MED28-203ENST00000503945 DTD2Q96FN9 168 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 RNF157Q96PX1 679 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 CHP1Q99653 195 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 GSDMCQ9BYG8 508 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 SEMA4CQ9C0C4 833 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 STRADBQ9C0K7 418 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 LRRN3Q9H3W5 708 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 CARS2Q9HA77 564 aaKnown RBP11.94□□□□□ -0.5
MED28-203ENST00000503945 FGF22Q9HCT0 170 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 ASCL3Q9NQ33 180 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 ASH1LQ9NR48 2969 aaKnown RBP11.94□□□□□ -0.5
MED28-203ENST00000503945 LRIT1Q9P2V4 623 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 APPL1Q9UKG1 709 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 CHKBQ9Y259 395 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 TTLL3Q9Y4R7 772 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 COL6A6A6NMZ7 2263 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 ZNF462Q96JM2 2506 aa11.94□□□□□ -0.5
MED28-203ENST00000503945 TENM4Q6N022 2769 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 A0A0J9YYE9 177 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 A0A1W2PNU3 283 aaPredicted RBP11.93□□□□□ -0.5
MED28-203ENST00000503945 PRSS38A1L453 326 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 NTN3O00634 580 aaPredicted RBP11.93□□□□□ -0.5
MED28-203ENST00000503945 KLK10O43240 276 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 MFSD11O43934 449 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 FZD6O60353 706 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 MAP3K6O95382 1288 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 JCHAINP01591 159 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 TRBC1P01850 177 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 CEACAM5P06731 702 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 PYGLP06737 847 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 ZNF30P17039 623 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 TEAD1P28347 426 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 TMPRSS3P57727 454 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 RPL26P61254 145 aaKnown RBP11.93□□□□□ -0.5
MED28-203ENST00000503945 CDK3Q00526 305 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 RHDQ02161 417 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 DSC2Q02487 901 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 ILF3Q12906 894 aaKnown RBP eCLIP11.93□□□□□ -0.5
MED28-203ENST00000503945 SLC10A2Q12908 348 aaPredicted RBP11.93□□□□□ -0.5
MED28-203ENST00000503945 BIRC2Q13490 618 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 LRRC66Q68CR7 880 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 RAET1GQ6H3X3 334 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 IGF2-ASQ6U949 168 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 TSPAN33Q86UF1 283 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 HEATR4Q86WZ0 1026 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 RHOT2Q8IXI1 618 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 RAVER1Q8IY67 606 aaKnown RBP11.93□□□□□ -0.5
MED28-203ENST00000503945 CCDC13Q8IYE1 715 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 NRSN1Q8IZ57 195 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 PQLC3Q8N755 202 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 KYQ8NBH2 561 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 RNF214Q8ND24 703 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 KIAA1524Q8TCG1 905 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 GPBAR1Q8TDU6 330 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 FAF2Q96CS3 445 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 WBP1Q96G27 269 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 PDXPQ96GD0 296 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 TMEM74Q96NL1 305 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 MCCC1Q96RQ3 725 aaPredicted RBP11.93□□□□□ -0.5
MED28-203ENST00000503945 ADGRE3Q9BY15 652 aa11.93□□□□□ -0.5
MED28-203ENST00000503945 DPH1Q9BZG8 443 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms