RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 TRIM43Q96BQ3 446 aaPredicted RBP11.2□□□□□ -0.62
AC055713.1-201ENST00000498967 GFM1Q96RP9 751 aaKnown RBP11.2□□□□□ -0.62
AC055713.1-201ENST00000498967 LPIN3Q9BQK8 851 aa11.2□□□□□ -0.62
AC055713.1-201ENST00000498967 POLR3BQ9NW08 1133 aaPredicted RBP11.2□□□□□ -0.62
AC055713.1-201ENST00000498967 PGAM1P18669 254 aa11.2□□□□□ -0.62
AC055713.1-201ENST00000498967 HTR2AP28223 471 aa11.2□□□□□ -0.62
AC055713.1-201ENST00000498967 ASMTP46597 345 aa11.2□□□□□ -0.62
AC055713.1-201ENST00000498967 DUS1LQ6P1R4 473 aaKnown RBP11.2□□□□□ -0.62
AC055713.1-201ENST00000498967 NUP54Q7Z3B4 507 aa11.2□□□□□ -0.62
AC055713.1-201ENST00000498967 KXD1Q9BQD3 176 aa11.2□□□□□ -0.62
AC055713.1-201ENST00000498967 TCF7L1Q9HCS4 588 aa11.2□□□□□ -0.62
AC055713.1-201ENST00000498967 FARSBQ9NSD9 589 aaKnown RBP11.2□□□□□ -0.62
AC055713.1-201ENST00000498967 MAGEL2Q9UJ55 1249 aa11.2□□□□□ -0.62
AC055713.1-201ENST00000498967 HACD1B0YJ81 288 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 ADRA2BP18089 450 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 HK1P19367 917 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 RPA3P35244 121 aaPredicted RBP11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 ACOT2P49753 483 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 PRKAG1P54619 331 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 RAPSNQ13702 412 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 GPR107Q5VW38 600 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 FAM199XQ6PEV8 388 aaPredicted RBP11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 SSX6Q7RTT6 188 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 SAPCD2Q86UD0 394 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 LAPTM4BQ86VI4 370 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 SETD6Q8TBK2 473 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 ZNF512BQ96KM6 892 aaPredicted RBP11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 CGRRF1Q99675 332 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 ALDH8A1Q9H2A2 487 aaPredicted RBP11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 MCCC2Q9HCC0 563 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 SEC14L3Q9UDX4 400 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 ROBO2Q9HCK4 1378 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 USP17L15C9J2P7 530 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 USP17L13C9JLJ4 530 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 USP17L11C9JVI0 530 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 USP17L18D6R9N7 530 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 USP17L22D6RA61 530 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 USP17L17D6RBQ6 530 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 USP17L19D6RCP7 530 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 USP17L20D6RJB6 530 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 EML1O00423 815 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 ZNF185O15231 689 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 RPL14P50914 215 aaKnown RBP11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 IRF8Q02556 426 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 USP17L24Q0WX57 530 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 CRY2Q49AN0 593 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 MTFR2Q6P444 385 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 FBXO30Q8TB52 745 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 LRRC46Q96FV0 321 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 CNDP2Q96KP4 475 aaKnown RBP11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 HSPA12BQ96MM6 686 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 TBCBQ99426 244 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 GTPBP2Q9BX10 602 aaKnown RBP11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 ANKRD33BA6NCL7 494 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 ZSCAN5BA6NJL1 495 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 POLRMTO00411 1230 aaKnown RBP11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 GSC2O15499 205 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 LAMP2P13473 410 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 GRIA1P42261 906 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 MASP1P48740 699 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 FBXO47Q5MNV8 452 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 SPESP1Q6UW49 350 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 TRAPPC5Q8IUR0 188 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 PRCCQ92733 491 aaPredicted RBP11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 SERPINB11Q96P15 392 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 TPK1Q9H3S4 243 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 DENND2DQ9H6A0 471 aaPredicted RBP11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 EDARQ9UNE0 448 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 NOX1Q9Y5S8 564 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 PMF1-BGLAPU3KQ54 211 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 CDC42BPGQ6DT37 1551 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 UNC13CQ8NB66 2214 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 BTN3A1O00481 513 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 PRKAB2O43741 272 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 NARSO43776 548 aaKnown RBP11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 XYLBO75191 536 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 MICAL2O94851 1124 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 RAB4AP20338 218 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 PAX7P23759 505 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 ACSL1P33121 698 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 SELENOVP59797 346 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 MPPE1Q53F39 396 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 LSM14AQ8ND56 463 aaKnown RBP11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 ACTRT1Q8TDG2 376 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 ZSWIM1Q9BR11 485 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 MYNNQ9NPC7 610 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 ARL8BQ9NVJ2 186 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 KANSL3Q9P2N6 904 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 ADAMDEC1O15204 470 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 C6orf222P0C671 652 aaPredicted RBP11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 CA9Q16790 459 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 N4BP2L1Q5TBK1 243 aaPredicted RBP11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 S100A7AQ86SG5 101 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 C12orf45Q8N5I9 185 aaPredicted RBP11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 TTLL6Q8N841 843 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 TUBG2Q9NRH3 451 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 NDUFAF4Q9P032 175 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 ASTN2O75129 1339 aaPredicted RBP11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 AP2A2O94973 939 aa11.19□□□□□ -0.62
AC055713.1-201ENST00000498967 CHSY3Q70JA7 882 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms