RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 SNIP1Q8TAD8 396 aaKnown RBP8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 FGF11Q92914 225 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 GRAMD1AQ96CP6 724 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 ANP32EQ9BTT0 268 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 TDRD1Q9BXT4 1180 aaKnown RBP8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 MAK16Q9BXY0 300 aaKnown RBP8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 TEX101Q9BY14 249 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 TRIM5Q9C035 493 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 TMEM168Q9H0V1 697 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 SYNDIG1Q9H7V2 258 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 POLR1BQ9H9Y6 1135 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 CYP4F12Q9HCS2 524 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 PHPT1Q9NRX4 125 aaPredicted RBP8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 DTLQ9NZJ0 730 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 DNPEPQ9ULA0 475 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 INTUQ9ULD6 942 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 CHKBQ9Y259 395 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 ENTPD2Q9Y5L3 495 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 UNC13CQ8NB66 2214 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 ACACAQ13085 2346 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 ZFHX4Q86UP3 3567 aa8.47□□□□□ -1.05
HMGXB4-207ENST00000498212 A0A0U1RQS6 177 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 CAPN8A6NHC0 703 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 C3orf70A6NLC5 250 aaPredicted RBP8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 B4DGG1 531 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 NTN3O00634 580 aaPredicted RBP8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 APOL1O14791 398 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 ZZEF1O43149 2961 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 KRT1P04264 644 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 CEACAM5P06731 702 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 ZFXP17010 805 aaPredicted RBP8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 TEAD1P28347 426 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 SLC1A1P43005 524 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 GPR1P46091 355 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 LSSP48449 732 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 CDK3Q00526 305 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 PTSQ03393 145 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 DPTQ07507 201 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 PPIDQ08752 370 aaKnown RBP8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 NIPAL4Q0D2K0 466 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 TBX2Q13207 712 aaPredicted RBP8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 IHHQ14623 411 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 C3orf38Q5JPI3 329 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 LRRC38Q5VT99 294 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 LRRC66Q68CR7 880 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 SLC9A4Q6AI14 798 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 SARM1Q6SZW1 724 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 TECPR1Q7Z6L1 1165 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 PDZD3Q86UT5 571 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 RFX6Q8HWS3 928 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 RHOT1Q8IXI2 618 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 FAM46DQ8NEK8 389 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 LPCAT1Q8NF37 534 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 GPR156Q8NFN8 814 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 CCL4L1Q8NHW4 92 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 ARRDC2Q8TBH0 407 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 KIAA1524Q8TCG1 905 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 CCDC74AQ96AQ1 378 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 ATXN7L3BQ96GX2 97 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 ZNF578Q96N58 590 aaPredicted RBP8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 LGMNQ99538 433 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 FRMD8Q9BZ67 464 aaPredicted RBP8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 DPEP2Q9H4A9 486 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 SUDS3Q9H7L9 328 aaPredicted RBP8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 CARS2Q9HA77 564 aaKnown RBP8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 PCDH9Q9HC56 1237 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 DDX56Q9NY93 547 aaKnown RBP8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 CD84Q9UIB8 345 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 RABGEF1Q9UJ41 708 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 SATB2Q9UPW6 733 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 HEY1Q9Y5J3 304 aa8.46□□□□□ -1.06
HMGXB4-207ENST00000498212 KCNK1O00180 336 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 PPP1R12AO14974 1030 aaPredicted RBP8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 CASC3O15234 703 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 SPOPO43791 374 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 NOBOXO60393 691 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 DXOO77932 396 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 CLDN7O95471 211 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 SOD1P00441 154 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 PRLP01236 227 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 JCHAINP01591 159 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 IVLP07476 585 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 TNNT1P13805 278 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 GLB1P16278 677 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 COMTP21964 271 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 ITPKBP27987 946 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 CD86P42081 329 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 GNPDA1P46926 289 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 PCBP4P57723 403 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 ERVPABLB-1P60509 514 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 RPL26P61254 145 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 CCL7P80098 99 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 IFI35P80217 286 aaPredicted RBP8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 CCDC173Q0VFZ6 552 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 AP1B1Q10567 949 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 ILF3Q12906 894 aaKnown RBP eCLIP8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 ZBTB17Q13105 803 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 PDK1Q15118 436 aa8.45□□□□□ -1.06
HMGXB4-207ENST00000498212 TCEAL1Q15170 157 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms