RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 F2RL1P55085 397 aa3.31□□□□□ -1.88
PSPC1-205ENST00000497722 RRP1P56182 461 aaKnown RBP3.31□□□□□ -1.88
PSPC1-205ENST00000497722 PRAMEP78395 509 aa3.31□□□□□ -1.88
PSPC1-205ENST00000497722 LRMPQ12912 555 aa3.31□□□□□ -1.88
PSPC1-205ENST00000497722 CSTF3Q12996 717 aaKnown RBP3.31□□□□□ -1.88
PSPC1-205ENST00000497722 OLIG2Q13516 323 aa3.31□□□□□ -1.88
PSPC1-205ENST00000497722 CRYMQ14894 314 aa3.31□□□□□ -1.88
PSPC1-205ENST00000497722 IZUMO4Q1ZYL8 232 aa3.31□□□□□ -1.88
PSPC1-205ENST00000497722 KCTD18Q6PI47 426 aaPredicted RBP3.31□□□□□ -1.88
PSPC1-205ENST00000497722 B3GNT6Q6ZMB0 384 aa3.31□□□□□ -1.88
PSPC1-205ENST00000497722 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.31□□□□□ -1.88
PSPC1-205ENST00000497722 IKBIPQ70UQ0 350 aa3.31□□□□□ -1.88
PSPC1-205ENST00000497722 TAOK1Q7L7X3 1001 aa3.31□□□□□ -1.88
PSPC1-205ENST00000497722 C16orf82Q7Z2V1 217 aa3.31□□□□□ -1.88
PSPC1-205ENST00000497722 TMTC2Q8N394 836 aa3.31□□□□□ -1.88
PSPC1-205ENST00000497722 C1orf131Q8NDD1 294 aaKnown RBP3.31□□□□□ -1.88
PSPC1-205ENST00000497722 CREB3L4Q8TEY5 395 aa3.31□□□□□ -1.88
PSPC1-205ENST00000497722 FAM216AQ8WUB2 273 aa3.31□□□□□ -1.88
PSPC1-205ENST00000497722 PSPC1Q8WXF1 523 aaKnown RBP3.31□□□□□ -1.88
PSPC1-205ENST00000497722 DNASE2BQ8WZ79 361 aa3.31□□□□□ -1.88
PSPC1-205ENST00000497722 ARHGEF2Q92974 986 aaKnown RBP3.31□□□□□ -1.88
PSPC1-205ENST00000497722 ZKSCAN4Q969J2 545 aaPredicted RBP3.31□□□□□ -1.88
PSPC1-205ENST00000497722 SDF4Q9BRK5 362 aa3.31□□□□□ -1.88
PSPC1-205ENST00000497722 BRF2Q9HAW0 419 aa3.31□□□□□ -1.88
PSPC1-205ENST00000497722 HINT3Q9NQE9 182 aaKnown RBP3.31□□□□□ -1.88
PSPC1-205ENST00000497722 AGO1Q9UL18 857 aaKnown RBP3.31□□□□□ -1.88
PSPC1-205ENST00000497722 CORO1CQ9ULV4 474 aaPredicted RBP3.31□□□□□ -1.88
PSPC1-205ENST00000497722 MTMR6Q9Y217 621 aa3.31□□□□□ -1.88
PSPC1-205ENST00000497722 PSAT1Q9Y617 370 aa3.31□□□□□ -1.88
PSPC1-205ENST00000497722 CEPT1Q9Y6K0 416 aa3.31□□□□□ -1.88
PSPC1-205ENST00000497722 CAPN7Q9Y6W3 813 aa3.31□□□□□ -1.88
PSPC1-205ENST00000497722 TDRD9Q8NDG6 1382 aaKnown RBP3.3□□□□□ -1.88
PSPC1-205ENST00000497722 A0A1W2PRG0 241 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 PI4KAP2A4QPH2 592 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 PGPEP1LA6NFU8 196 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 HSPA12AO43301 675 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 SCGB1D1O95968 90 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 EIF2S1P05198 315 aaKnown RBP3.3□□□□□ -1.88
PSPC1-205ENST00000497722 FCGR1AP12314 374 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 ICAM3P32942 547 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 EIF2S3P41091 472 aaKnown RBP3.3□□□□□ -1.88
PSPC1-205ENST00000497722 METAP2P50579 478 aaKnown RBP eCLIP3.3□□□□□ -1.88
PSPC1-205ENST00000497722 GALCP54803 685 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 SEC61A1P61619 476 aaKnown RBP3.3□□□□□ -1.88
PSPC1-205ENST00000497722 RPL36AP83881 106 aaKnown RBP3.3□□□□□ -1.88
PSPC1-205ENST00000497722 TFAP4Q01664 338 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 FOXM1Q08050 763 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 EIF4A2Q14240 407 aaKnown RBP3.3□□□□□ -1.88
PSPC1-205ENST00000497722 USP41Q3LFD5 358 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 C9orf57Q5W0N0 161 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 ITPRIPL1Q6GPH6 555 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 RGMBQ6NW40 437 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 TTI2Q6NXR4 508 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 WDR73Q6P4I2 378 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 CYP20A1Q6UW02 462 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 PXKQ7Z7A4 578 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 ADSSL1Q8N142 457 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 SPATA6LQ8N4H0 392 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 NGEFQ8N5V2 710 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 KCNH5Q8NCM2 988 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 NEK9Q8TD19 979 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 SCFD2Q8WU76 684 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 SNAPC3Q92966 411 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 RTP4Q96DX8 246 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 MMABQ96EY8 250 aaPredicted RBP3.3□□□□□ -1.88
PSPC1-205ENST00000497722 C3orf30Q96M34 536 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 MAP7D2Q96T17 732 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 TKTL2Q9H0I9 626 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 PLEKHA4Q9H4M7 779 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 C6orf106Q9H6K1 298 aaPredicted RBP3.3□□□□□ -1.88
PSPC1-205ENST00000497722 PPP1R3EQ9H7J1 279 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 C17orf75Q9HAS0 396 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 PLEKHA5Q9HAU0 1116 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 RANGRFQ9HD47 186 aaPredicted RBP3.3□□□□□ -1.88
PSPC1-205ENST00000497722 SLC9A2Q9UBY0 812 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 NFS1Q9Y697 457 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 STON1Q9Y6Q2 735 aa3.3□□□□□ -1.88
PSPC1-205ENST00000497722 FAM237AA0A1B0GTK4 181 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 A0A1W2PQM1 296 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 FSD2A1L4K1 749 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 BTBD18B2RXH4 712 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 J3KR12 359 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 SOCS6O14544 535 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 VCYO14598 125 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 CLGNO14967 610 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 PAGE4O60829 102 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 MLYCDO95822 493 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 EGFP01133 1207 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 CYC1P08574 325 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 CLTBP09497 229 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 DDX5P17844 614 aaKnown RBP3.29□□□□□ -1.88
PSPC1-205ENST00000497722 ITGB8P26012 769 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 HNRNPH1P31943 449 aaKnown RBP3.29□□□□□ -1.88
PSPC1-205ENST00000497722 GNL1P36915 607 aaPredicted RBP3.29□□□□□ -1.88
PSPC1-205ENST00000497722 IL15P40933 162 aaPredicted RBP3.29□□□□□ -1.88
PSPC1-205ENST00000497722 RGS2P41220 211 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 PRCPP42785 496 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 RAD23BP54727 409 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 CEBPZQ03701 1054 aaKnown RBP3.29□□□□□ -1.88
PSPC1-205ENST00000497722 MYBPHQ13203 477 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms