RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	TNFRSF12A	Q9NP84	129 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	MORF4L1	Q9UBU8	362 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ZNF221	Q9UK13	617 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SPEF1	Q9Y4P9	236 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CIT	O14578	2027 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	NAV1	Q8NEY1	1877 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ARAP2	Q8WZ64	1704 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RREB1	Q92766	1687 aa		10.63	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ERI2	A8K979	691 aa	Known RBP	10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ZBTB24	O43167	697 aa	Predicted RBP	10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TSPAN3	O60637	253 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ABCB7	O75027	752 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SIX3	O95343	332 aa	Predicted RBP	10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	INHBB	P09529	407 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	BAG6	P46379	1132 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	IFITM2	Q01629	132 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TAB1	Q15750	504 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CATSPERE	Q5SY80	951 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SPATA22	Q8NHS9	363 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TMBIM1	Q969X1	311 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	NECTIN4	Q96NY8	510 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	C14orf119	Q9NWQ9	140 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SLCO3A1	Q9UIG8	710 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	FEM1B	Q9UK73	627 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	LRRC14B	A6NHZ5	514 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	YDJC	A8MPS7	323 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	DFFA	O00273	331 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RFPL2	O75678	378 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	FARP2	O94887	1054 aa	Predicted RBP	10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CD4	P01730	458 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ICAM1	P05362	532 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PPIL2	Q13356	520 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	HERC3	Q15034	1050 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	HSDL1	Q3SXM5	330 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	MAP1S	Q66K74	1059 aa	Predicted RBP	10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CEP97	Q8IW35	865 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ELMOD2	Q8IZ81	293 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SPART	Q8N0X7	666 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CELF2-AS1	Q8N7Q2	184 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ITFG1	Q8TB96	612 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	MCOLN3	Q8TDD5	553 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	OSCP1	Q8WVF1	389 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	S100Z	Q8WXG8	99 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TBCB	Q99426	244 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	NTPCR	Q9BSD7	190 aa	Known RBP	10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	THUMPD3	Q9BV44	507 aa	Known RBP	10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	EXOSC4	Q9NPD3	245 aa	Known RBP	10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PAQR5	Q9NXK6	330 aa	Predicted RBP	10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	IL37	Q9NZH6	218 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ZNF701	M0R085	212 aa	Predicted RBP	10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	EEF2K	O00418	725 aa	Known RBP	10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PPP6C	O00743	305 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	AHSG	P02765	367 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TXN	P10599	105 aa	Known RBP	10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	MTHFR	P42898	656 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	MTPN	P58546	118 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ILF2	Q12905	390 aa	Known RBP	10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TRAF3	Q13114	568 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	STXBP5	Q5T5C0	1151 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	AGAP7P	Q5VUJ5	663 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CCBE1	Q6UXH8	406 aa	Predicted RBP	10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	OTOP3	Q7RTS5	596 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PIWIL4	Q7Z3Z4	852 aa	Known RBP	10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	LINC00523	Q86TU6	105 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	P2RY8	Q86VZ1	359 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CADM2	Q8N3J6	435 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ESAM	Q96AP7	390 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	BIRC7	Q96CA5	298 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	MCRS1	Q96EZ8	462 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	NT5C1A	Q9BXI3	368 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PXMP2	Q9NR77	195 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	AASDHPPT	Q9NRN7	309 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SNTG2	Q9NY99	539 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CRYL1	Q9Y2S2	319 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SNX10	Q9Y5X0	201 aa		10.62	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PITX1	P78337	314 aa	Predicted RBP	10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TRAP1	Q12931	704 aa	Known RBP	10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ESRP1	Q6NXG1	681 aa	Known RBP	10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ZCCHC8	Q6NZY4	707 aa	Known RBP	10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	SLC38A6	Q8IZM9	456 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	PDPR	Q8NCN5	879 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	FAM83F	Q8NEG4	500 aa	Predicted RBP	10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ATG4C	Q96DT6	458 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	QKI	Q96PU8	341 aa	Known RBP eCLIP	10.61	□□□□□ -0.71	8e-8	■■■■□ 26.5
TRAPPC12-223	ENST00000497597	ZNF670	Q9BS34	389 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	N6AMT1	Q9Y5N5	214 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	GOLGA4	Q13439	2230 aa	Known RBP	10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	KRT87P	A6NCN2	255 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597		M0QYT0	321 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TNFRSF10A	O00220	468 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	TOMM70	O94826	608 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	RASAL1	O95294	804 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	LYPLA2	O95372	231 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	VDR	P11473	427 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	FCGR1A	P12314	374 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	CAPN3	P20807	821 aa		10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	ATP5F1	P24539	256 aa	Predicted RBP	10.61	□□□□□ -0.71
TRAPPC12-223	ENST00000497597	GGT5	P36269	586 aa		10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms