RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 CAMK1GQ96NX5 476 aa4.11□□□□□ -1.75
SMC4-225ENST00000497203 WACQ9BTA9 647 aa4.11□□□□□ -1.75
SMC4-225ENST00000497203 MMTAG2Q9BU76 263 aaKnown RBP4.11□□□□□ -1.75
SMC4-225ENST00000497203 MXD3Q9BW11 206 aa4.11□□□□□ -1.75
SMC4-225ENST00000497203 C1QTNF5Q9BXJ0 243 aa4.11□□□□□ -1.75
SMC4-225ENST00000497203 DDX4Q9NQI0 724 aaKnown RBP4.11□□□□□ -1.75
SMC4-225ENST00000497203 FBXL17Q9UF56 701 aa4.11□□□□□ -1.75
SMC4-225ENST00000497203 ZNF644Q9H582 1327 aaPredicted RBP4.11□□□□□ -1.75
SMC4-225ENST00000497203 FAM90A10PA6NDY2 464 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 VWA5AO00534 786 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 ITM2AO43736 263 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 JRKO75564 520 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 CYP1A2P05177 515 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 NR2F1P10589 423 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 KRTAP5-9P26371 169 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 HOXC9P31274 260 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 KCNJ4P48050 445 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 LMAN1P49257 510 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 CAMPP49913 170 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 IKQ13123 557 aaPredicted RBP4.1□□□□□ -1.75
SMC4-225ENST00000497203 FHL1Q13642 323 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 GPR18Q14330 331 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 NTRK2Q16620 822 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 ASTE1Q2TB18 679 aaPredicted RBP4.1□□□□□ -1.75
SMC4-225ENST00000497203 GPR139Q6DWJ6 353 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 KRTAP5-1Q6L8H4 278 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 METTL2BQ6P1Q9 378 aaKnown RBP4.1□□□□□ -1.75
SMC4-225ENST00000497203 HAPLN4Q86UW8 402 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 PELI3Q8N2H9 469 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 TMTC2Q8N394 836 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 POC5Q8NA72 575 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 C7orf57Q8NEG2 295 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 NSMCE1Q8WV22 266 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 TRIB2Q92519 343 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 INPP5DQ92835 1189 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 ZKSCAN4Q969J2 545 aaPredicted RBP4.1□□□□□ -1.75
SMC4-225ENST00000497203 METTL2AQ96IZ6 378 aaKnown RBP4.1□□□□□ -1.75
SMC4-225ENST00000497203 SH3GL2Q99962 352 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 SLF1Q9BQI6 1058 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 EBF3Q9H4W6 596 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 GPR108Q9NPR9 543 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 GIMAP4Q9NUV9 329 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 TMEM51Q9NW97 253 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 CWC15Q9P013 229 aaKnown RBP4.1□□□□□ -1.75
SMC4-225ENST00000497203 MRPL15Q9P015 296 aaKnown RBP4.1□□□□□ -1.75
SMC4-225ENST00000497203 MORF4L1Q9UBU8 362 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 STON1Q9Y6Q2 735 aa4.1□□□□□ -1.75
SMC4-225ENST00000497203 PROB1E7EW31 1015 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 H0YGN5 161 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 WNT9BO14905 357 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 KCNAB3O43448 404 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 LDB2O43679 373 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 GJB3O75712 270 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 HIST1H2ABP04908 130 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 HIST1H2ADP20671 130 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 PON1P27169 355 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 PRCPP42785 496 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 SLC15A1P46059 708 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 METAP2P50579 478 aaKnown RBP eCLIP4.09□□□□□ -1.75
SMC4-225ENST00000497203 MFAP4P55083 255 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 P2RX3P56373 397 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 MRPS34P82930 218 aaKnown RBP4.09□□□□□ -1.75
SMC4-225ENST00000497203 PPATQ06203 517 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 BECN1Q14457 450 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 CDONQ4KMG0 1287 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 DNTTIP2Q5QJE6 756 aaKnown RBP4.09□□□□□ -1.75
SMC4-225ENST00000497203 GGNBP1Q5YKI7 109 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 PMS2CLQ68D20 193 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 KIAA0930Q6ICG6 404 aaPredicted RBP4.09□□□□□ -1.75
SMC4-225ENST00000497203 PQLC2Q6ZP29 291 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 C9orf47Q6ZRZ4 202 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 HIST3H2AQ7L7L0 130 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 CACNA2D4Q7Z3S7 1137 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 EPHX4Q8IUS5 362 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 CCDC13Q8IYE1 715 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 OR14L1PQ8NHC6 308 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 ELMOD3Q96FG2 381 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 APOLD1Q96LR9 279 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 OR2A14Q96R47 310 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 PCGF1Q9BSM1 259 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 NDST4Q9H3R1 872 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 PLK3Q9H4B4 646 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 SLC28A3Q9HAS3 691 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 MKKSQ9NPJ1 570 aaPredicted RBP4.09□□□□□ -1.75
SMC4-225ENST00000497203 HINT3Q9NQE9 182 aaKnown RBP4.09□□□□□ -1.75
SMC4-225ENST00000497203 OR6C3Q9NZP0 311 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 UBA2Q9UBT2 640 aaPredicted RBP4.09□□□□□ -1.75
SMC4-225ENST00000497203 RCOR1Q9UKL0 485 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 NENFQ9UMX5 172 aa4.09□□□□□ -1.75
SMC4-225ENST00000497203 LOC100509620A0A075B734 347 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 A0A1B0GVM2 712 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 RPS10-NUDT3A0A1W2PQS6 291 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 CTDSP2O14595 271 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 P4HA2O15460 535 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 INSIG1O15503 277 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 ASAP2O43150 1006 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 TPPPO94811 219 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 OAZ2O95190 189 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 CSPG5O95196 566 aa4.08□□□□□ -1.76
SMC4-225ENST00000497203 PGM3O95394 542 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms