RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 SPIRE1Q08AE8 756 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CHAF1BQ13112 559 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 DYRK1AQ13627 763 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 PMS2P11Q13670 270 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 POLD3Q15054 466 aaPredicted RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 FAM110CQ1W6H9 321 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CNPY1Q3B7I2 92 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 HERC4Q5GLZ8 1057 aaPredicted RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 TTC22Q5TAA0 569 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 ARHGEF16Q5VV41 709 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CES4AQ5XG92 561 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 OR52E8Q6IFG1 317 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 ANO7Q6IWH7 933 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 RINT1Q6NUQ1 792 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 PRMT9Q6P2P2 845 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 MTFR2Q6P444 385 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 LILRA6Q6PI73 481 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 UBE3BQ7Z3V4 1068 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 TMCO2Q7Z6W1 182 aaPredicted RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 TTC7BQ86TV6 843 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 DNAJC10Q8IXB1 793 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 IFT20Q8IY31 132 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 ARHGAP24Q8N264 748 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 MIER2Q8N344 545 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 FBXW8Q8N3Y1 598 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CPSF7Q8N684 471 aaKnown RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 ATP6V0D2Q8N8Y2 350 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 NUDT10Q8NFP7 164 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 OR6B3Q8NGW1 331 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 OR52N1Q8NH53 320 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 MCOLN3Q8TDD5 553 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 LPGAT1Q92604 370 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 VPS33AQ96AX1 596 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 PHF21AQ96BD5 680 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 HMCESQ96FZ2 354 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 NUDT11Q96G61 164 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CALML4Q96GE6 196 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 FAM71F1Q96KD3 344 aaPredicted RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 FAM227BQ96M60 508 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CCDC140Q96MF4 163 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 OR1F2PQ96R84 312 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 MMS19Q96T76 1030 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 SYT15Q9BQS2 421 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CNPY3Q9BT09 278 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 SF3B5Q9BWJ5 86 aaKnown RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 TMEM60Q9H2L4 133 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 POFUT1Q9H488 388 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 SH2D4AQ9H788 454 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 WDR26Q9H7D7 661 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 COPS7BQ9H9Q2 264 aaPredicted RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 EPB41L5Q9HCM4 733 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 MID1IP1Q9NPA3 183 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 PARD6AQ9NPB6 346 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 INTS13Q9NVM9 706 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 VSX1Q9NZR4 365 aaPredicted RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CACNG4Q9UBN1 327 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 SERPINB13Q9UIV8 391 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 NUP50Q9UKX7 468 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CNOT11Q9UKZ1 510 aaKnown RBP3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 SNX7Q9UNH6 387 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 CYP46A1Q9Y6A2 500 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 DIP2BQ9P265 1576 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 IGSF1Q8N6C5 1336 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 GAPVD1Q14C86 1478 aa3.12□□□□□ -1.91
SNRNP48-202ENST00000496946 A0A1B0GVL5 298 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 SYCE3A1L190 88 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 OR5K3A6NET4 321 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 EFCAB10A6NFE3 127 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 FAM47DPA6NHR8 397 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 E7ENQ6 273 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF561-AS1K7EIQ3 104 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 CHMP2AO43633 222 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 SERPINI2O75830 405 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 CABYRO75952 493 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 PCDH8O95206 1070 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 PGLSO95336 258 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 RAB3DO95716 219 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 DHFRP00374 187 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 KRT19P08727 400 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ZCCHC18P0CG32 403 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 NR2F1P10589 423 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 GHRP10912 638 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 UMPSP11172 480 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 CYP19A1P11511 503 aaPredicted RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 MYL6BP14649 208 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 HNRNPLP14866 589 aaKnown RBP eCLIP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 DARSP14868 501 aaKnown RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ITGALP20701 1170 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 CHMP24386 653 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 AKT1P31749 480 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 CASP14P31944 242 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 BUD31P41223 144 aaPredicted RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 MAGEA4P43358 317 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC6A11P48066 632 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 CAMLGP49069 296 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 NPY2RP49146 381 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 FNTBP49356 437 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 CASP4P49662 377 aa3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 ATXN3P54252 364 aaPredicted RBP3.11□□□□□ -1.91
SNRNP48-202ENST00000496946 CREB5Q02930 508 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms