RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 ZNF578Q96N58 590 aaPredicted RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 OR52B2Q96RD2 323 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 SECISBP2Q96T21 854 aaKnown RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 USB1Q9BQ65 265 aaKnown RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 SLC6A17Q9H1V8 727 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 CPVLQ9H3G5 476 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 NMRAL1Q9HBL8 299 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 MCCC2Q9HCC0 563 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 UBQLN2Q9UHD9 624 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 NUFIP1Q9UHK0 495 aaKnown RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 ZNF222Q9UK12 451 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 PCDHGB6Q9Y5F9 930 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 LYVE1Q9Y5Y7 322 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 FRMPD2Q68DX3 1309 aaPredicted RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 TECPR2O15040 1411 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 MEIOCA2RUB1 952 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 PRR23D1E9PI22 279 aaPredicted RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 ORC5O43913 435 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 PRPSAP2O60256 369 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 WDPCPO95876 746 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 MPOP05164 745 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 POLBP06746 335 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 PRR23D2P0DMB1 279 aaPredicted RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 IL7RP16871 459 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 PGDP52209 483 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 ERVK-21P61565 698 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 ACOX1Q15067 660 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 DDR2Q16832 855 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 FAM214AQ32MH5 1076 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 ASPRV1Q53RT3 343 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 CCDC157Q569K6 752 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 BRMS1LQ5PSV4 323 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 HES5Q5TA89 166 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 LRRC38Q5VT99 294 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 REP15Q6BDI9 236 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 TMEM270Q6UE05 265 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 SNX20Q7Z614 316 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 CELF2-AS1Q8N7Q2 184 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 TRPV3Q8NET8 790 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 ADAM32Q8TC27 787 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 RIT1Q92963 219 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 UROC1Q96N76 676 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 TRNT1Q96Q11 434 aaKnown RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 MNTQ99583 582 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 FGFBP2Q9BYJ0 223 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 CYP3A43Q9HB55 503 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 XPNPEP3Q9NQH7 507 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 CCM2LQ9NUG4 571 aaPredicted RBP8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 NENFQ9UMX5 172 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 PCDHGA7Q9Y5G6 932 aa8.19□□□□□ -1.1
CRNKL1-205ENST00000496549 ASTN1O14525 1302 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 SPATA31A6Q5VVP1 1343 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 ZNF780AO75290 641 aaPredicted RBP8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 CYP7B1O75881 506 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 AZGP1P25311 298 aaKnown RBP8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 ARNTP27540 789 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 CDH6P55285 790 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 EVA1CP58658 441 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 TAS2R40P59535 323 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 FLI1Q01543 452 aaPredicted RBP8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 POU5F1BQ06416 359 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 DAG1Q14118 895 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 FUT11Q495W5 492 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 PPP1R18Q6NYC8 613 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 ANKRD52Q8NB46 1076 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 NDNFQ8TB73 568 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 ZNF431Q8TF32 576 aaPredicted RBP8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 BIRC7Q96CA5 298 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 TEKT5Q96M29 485 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 TMEM47Q9BQJ4 181 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 SLC30A2Q9BRI3 323 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 UGT2B28Q9BY64 529 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 FAM49AQ9H0Q0 323 aaPredicted RBP8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 ZBTB26Q9HCK0 441 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 HPF1Q9NWY4 346 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 SPEF2Q9C093 1822 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 USP17L3A6NCW0 530 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 USP17L4A6NCW7 530 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 PPEF1O14829 653 aaPredicted RBP8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 ZBTB14O43829 449 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 AMHP03971 560 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 VEGFAP15692 232 aaPredicted RBP8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 MPSTP25325 297 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 HTR3AP46098 478 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 RPS5P46782 204 aaKnown RBP8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 GAD2Q05329 585 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 ZMYND11Q15326 602 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 SMTNL2Q2TAL5 461 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 Q3ZCU0 254 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 C6orf141Q5SZD1 244 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 USP17L1Q7RTZ2 530 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 WDR49Q8IV35 697 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 HID1Q8IV36 788 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 UNC5BQ8IZJ1 945 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 ZNF366Q8N895 744 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 OR6F1Q8NGZ6 308 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 FCGR1BQ92637 280 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 FEM1CQ96JP0 617 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 SLC4A9Q96Q91 983 aa8.18□□□□□ -1.1
CRNKL1-205ENST00000496549 BTBD2Q9BX70 525 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms