RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 Q6ZVL8 140 aa12.94□□□□□ -0.34
FN1-226ENST00000496542 RAB11FIP2Q7L804 512 aa12.94□□□□□ -0.34
FN1-226ENST00000496542 SPRED1Q7Z699 444 aa12.94□□□□□ -0.34
FN1-226ENST00000496542 CLEC14AQ86T13 490 aa12.94□□□□□ -0.34
FN1-226ENST00000496542 JAMLQ86YT9 394 aa12.94□□□□□ -0.34
FN1-226ENST00000496542 FBXO39Q8N4B4 442 aa12.94□□□□□ -0.34
FN1-226ENST00000496542 KIAA1524Q8TCG1 905 aa12.94□□□□□ -0.34
FN1-226ENST00000496542 CCDC97Q96F63 343 aaPredicted RBP12.94□□□□□ -0.34
FN1-226ENST00000496542 MCCC1Q96RQ3 725 aaPredicted RBP12.94□□□□□ -0.34
FN1-226ENST00000496542 TEX101Q9BY14 249 aa12.94□□□□□ -0.34
FN1-226ENST00000496542 KCTD5Q9NXV2 234 aa12.94□□□□□ -0.34
FN1-226ENST00000496542 CTTNBP2NLQ9P2B4 639 aa12.94□□□□□ -0.34
FN1-226ENST00000496542 ZFC3H1O60293 1989 aaKnown RBP12.94□□□□□ -0.34
FN1-226ENST00000496542 TMX2-CTNND1H3BSU7 103 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 TK2O00142 265 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 PSMD11O00231 422 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 CEACAM5P06731 702 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 PDHA1P08559 390 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 KRT10P13645 584 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 HGFP14210 728 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 CCNB1P14635 433 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 CASP14P31944 242 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 UGT1A5P35504 534 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 GARSP41250 739 aaKnown RBP12.93□□□□□ -0.34
FN1-226ENST00000496542 MLLT3P42568 568 aaPredicted RBP12.93□□□□□ -0.34
FN1-226ENST00000496542 ARSEP51690 589 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 EPHB1P54762 984 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 MAZP56270 477 aaKnown RBP12.93□□□□□ -0.34
FN1-226ENST00000496542 SKOR1P84550 965 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 GALNT2Q10471 571 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 ILF3Q12906 894 aaKnown RBP eCLIP12.93□□□□□ -0.34
FN1-226ENST00000496542 EIF3IQ13347 325 aaKnown RBP12.93□□□□□ -0.34
FN1-226ENST00000496542 HLTFQ14527 1009 aaKnown RBP eCLIP12.93□□□□□ -0.34
FN1-226ENST00000496542 NCBP2-AS2Q69YL0 99 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 LRRC49Q8IUZ0 686 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 TEX26Q8N6G2 289 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 KCTD6Q8NC69 237 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 FAM71BQ8TC56 605 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 PTCD2Q8WV60 388 aaKnown RBP12.93□□□□□ -0.34
FN1-226ENST00000496542 PIH1D2Q8WWB5 315 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 SCRN2Q96FV2 425 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 TMEM74Q96NL1 305 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 SMIM14Q96QK8 99 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 GSDMCQ9BYG8 508 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 FRMD8Q9BZ67 464 aaPredicted RBP12.93□□□□□ -0.34
FN1-226ENST00000496542 POLR1EQ9GZS1 481 aaKnown RBP12.93□□□□□ -0.34
FN1-226ENST00000496542 SPATS2LQ9NUQ6 558 aaKnown RBP12.93□□□□□ -0.34
FN1-226ENST00000496542 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.93□□□□□ -0.34
FN1-226ENST00000496542 LRIT1Q9P2V4 623 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 PISDQ9UG56 409 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 CD84Q9UIB8 345 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 APPL1Q9UKG1 709 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 SUFUQ9UMX1 484 aa12.93□□□□□ -0.34
FN1-226ENST00000496542 ERVH48-1M5A8F1 160 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 FLNBO75369 2602 aaKnown RBP12.92□□□□□ -0.34
FN1-226ENST00000496542 C1QL1O75973 258 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 PROSCO94903 275 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 JMJD7P0C870 316 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 AK4P27144 223 aaPredicted RBP12.92□□□□□ -0.34
FN1-226ENST00000496542 SLC5A2P31639 672 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 CCKBRP32239 447 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 GPR1P46091 355 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 POLD2P49005 469 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 TAS2R40P59535 323 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 DSC2Q02487 901 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 VAC14Q08AM6 782 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 C19orf57Q0VDD7 668 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 CLN3Q13286 438 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 PAFAH1B3Q15102 231 aaKnown RBP12.92□□□□□ -0.34
FN1-226ENST00000496542 ZSCAN23Q3MJ62 389 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 AMZ1Q400G9 498 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 MAP9Q49MG5 647 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 TAF1BQ53T94 588 aaPredicted RBP12.92□□□□□ -0.34
FN1-226ENST00000496542 ANKRD20A8PQ5CZ79 823 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 ZFYVE27Q5T4F4 411 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 LRRC66Q68CR7 880 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 TIGD7Q6NT04 549 aaPredicted RBP12.92□□□□□ -0.34
FN1-226ENST00000496542 SLC30A9Q6PML9 568 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 RFLNAQ6ZTI6 216 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 NRROSQ86YC3 692 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 NDUFAF2Q8N183 169 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 CBARPQ8N350 705 aaPredicted RBP12.92□□□□□ -0.34
FN1-226ENST00000496542 GPBAR1Q8TDU6 330 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 ZDHHC1Q8WTX9 485 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 LRRN4Q8WUT4 740 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 CTNNBL1Q8WYA6 563 aaPredicted RBP12.92□□□□□ -0.34
FN1-226ENST00000496542 AP2M1Q96CW1 435 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 ZNF670Q9BS34 389 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 PACSIN1Q9BY11 444 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 XPO4Q9C0E2 1151 aaKnown RBP12.92□□□□□ -0.34
FN1-226ENST00000496542 RBM22Q9NW64 420 aaKnown RBP eCLIP12.92□□□□□ -0.342e-13■□□□□ 11
FN1-226ENST00000496542 TAAR2Q9P1P5 351 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 NENFQ9UMX5 172 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 LOXL2Q9Y4K0 774 aa12.92□□□□□ -0.34
FN1-226ENST00000496542 TLN1Q9Y490 2541 aaKnown RBP12.91□□□□□ -0.34
FN1-226ENST00000496542 RHPN2P1A8MT19 583 aa12.91□□□□□ -0.34
FN1-226ENST00000496542 MATN3O15232 486 aa12.91□□□□□ -0.34
FN1-226ENST00000496542 NUDT21O43809 227 aaKnown RBP12.91□□□□□ -0.34
FN1-226ENST00000496542 FUCA1P04066 466 aa12.91□□□□□ -0.34
FN1-226ENST00000496542 TPM3P06753 285 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms