RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 ELFN1P0C7U0 828 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 ZNF28P17035 718 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 LPOP22079 712 aaPredicted RBP11.65□□□□□ -0.54
ATG3-209ENST00000496423 MAPK9P45984 424 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 NASPP49321 788 aaPredicted RBP11.65□□□□□ -0.54
ATG3-209ENST00000496423 RHOAP61586 193 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 HHEXQ03014 270 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 CETN1Q12798 172 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 RABEP1Q15276 862 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 TAF5Q15542 800 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 SMTNL2Q2TAL5 461 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 ATXN7L2Q5T6C5 722 aaPredicted RBP11.65□□□□□ -0.54
ATG3-209ENST00000496423 FAM173BQ6P4H8 233 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 BRAT1Q6PJG6 821 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 MED25Q71SY5 747 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 CDH24Q86UP0 819 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 PPP1R3BQ86XI6 285 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 ZNF354CQ86Y25 554 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 NXPE1Q8N323 547 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 PPM1KQ8N3J5 372 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 TMEM102Q8N9M5 508 aaPredicted RBP11.65□□□□□ -0.54
ATG3-209ENST00000496423 SMAD5Q99717 465 aaKnown RBP11.65□□□□□ -0.54
ATG3-209ENST00000496423 ZSWIM1Q9BR11 485 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 LGR4Q9BXB1 951 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 MAGEH1Q9H213 219 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 SUV39H2Q9H5I1 410 aa11.65□□□□□ -0.54
ATG3-209ENST00000496423 FARSAQ9Y285 508 aaKnown RBP11.65□□□□□ -0.54
ATG3-209ENST00000496423 GOLGA6L3A6NEY3 463 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 A6NL46 340 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 BUB1O43683 1085 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 SPAG6O75602 509 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 TMEM63AO94886 807 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 MYL1P05976 194 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 SNRPB2P08579 225 aaKnown RBP11.64□□□□□ -0.55
ATG3-209ENST00000496423 CD99P14209 185 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 SLC2A4P14672 509 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 CXCR3P49682 368 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 POLR2LP62875 67 aaKnown RBP11.64□□□□□ -0.55
ATG3-209ENST00000496423 DEUP1Q05D60 604 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.64□□□□□ -0.55
ATG3-209ENST00000496423 CBWD6Q4V339 395 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 CBWD3Q5JTY5 395 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 CBWD5Q5RIA9 395 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 ZNF761Q86XN6 746 aaPredicted RBP11.64□□□□□ -0.55
ATG3-209ENST00000496423 ZNF683Q8IZ20 524 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 AVL9Q8NBF6 648 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 LINC00301Q8NCQ3 95 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 ZNF641Q96N77 438 aaPredicted RBP11.64□□□□□ -0.55
ATG3-209ENST00000496423 NUDT9Q9BW91 350 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 BRD8Q9H0E9 1235 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 METTL14Q9HCE5 456 aaKnown RBP11.64□□□□□ -0.55
ATG3-209ENST00000496423 PDE7BQ9NP56 450 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 SIDT1Q9NXL6 827 aaKnown RBP11.64□□□□□ -0.55
ATG3-209ENST00000496423 PPARGC1AQ9UBK2 798 aaKnown RBP11.64□□□□□ -0.55
ATG3-209ENST00000496423 SUCOQ9UBS9 1254 aaKnown RBP11.64□□□□□ -0.55
ATG3-209ENST00000496423 ZNHIT2Q9UHR6 403 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 SUFUQ9UMX1 484 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 ATP8A1Q9Y2Q0 1164 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 ACTL7AQ9Y615 435 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 MTORP42345 2549 aa11.64□□□□□ -0.55
ATG3-209ENST00000496423 NIPBLQ6KC79 2804 aaeCLIP11.64□□□□□ -0.55
ATG3-209ENST00000496423 TRBV23OR9-2A0A075B6M9 112 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 GPR37O15354 613 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 BUB1BO60566 1050 aaPredicted RBP11.63□□□□□ -0.55
ATG3-209ENST00000496423 GRAP2O75791 330 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 MAP3K6O95382 1288 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 CEACAM5P06731 702 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 FGF5P12034 268 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 MMP12P39900 470 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 ADCY8P40145 1251 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 PTGIRP43119 386 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 MAPKAPK2P49137 400 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 ACOX1Q15067 660 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 INO80DQ53TQ3 878 aaPredicted RBP11.63□□□□□ -0.55
ATG3-209ENST00000496423 VWA5B1Q5TIE3 1220 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 DENND1BQ6P3S1 775 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 C11orf57Q6ZUT1 292 aaPredicted RBP11.63□□□□□ -0.55
ATG3-209ENST00000496423 SLC9B2Q86UD5 537 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 FJX1Q86VR8 437 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 DNAAF5Q86Y56 855 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 PARP9Q8IXQ6 854 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 GLIS1Q8NBF1 620 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 SGSM3Q96HU1 749 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 ELMO2Q96JJ3 720 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 ZNF396Q96N95 335 aaPredicted RBP11.63□□□□□ -0.55
ATG3-209ENST00000496423 FCRL4Q96PJ5 515 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 SARS2Q9NP81 518 aaKnown RBP11.63□□□□□ -0.55
ATG3-209ENST00000496423 PIGVQ9NUD9 493 aa11.63□□□□□ -0.55
ATG3-209ENST00000496423 CCDC168Q8NDH2 2452 aa11.62□□□□□ -0.55
ATG3-209ENST00000496423 F5H423 210 aaPredicted RBP11.62□□□□□ -0.55
ATG3-209ENST00000496423 KDELR3O43731 214 aa11.62□□□□□ -0.55
ATG3-209ENST00000496423 DAB1O75553 588 aa11.62□□□□□ -0.55
ATG3-209ENST00000496423 IPO13O94829 963 aaKnown RBP11.62□□□□□ -0.55
ATG3-209ENST00000496423 IVLP07476 585 aa11.62□□□□□ -0.55
ATG3-209ENST00000496423 EDN3P14138 238 aa11.62□□□□□ -0.55
ATG3-209ENST00000496423 HTR1EP28566 365 aa11.62□□□□□ -0.55
ATG3-209ENST00000496423 ACVRL1P37023 503 aa11.62□□□□□ -0.55
ATG3-209ENST00000496423 PDCLQ13371 301 aa11.62□□□□□ -0.55
ATG3-209ENST00000496423 ZNF235Q14590 738 aa11.62□□□□□ -0.55
ATG3-209ENST00000496423 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms