RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, human

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-223	ENST00000496296	TYR	P14679	529 aa		21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	STMN1	P16949	149 aa		21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	PRDX6	P30041	224 aa		21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	CTBP1	Q13363	440 aa		21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	PITRM1	Q5JRX3	1037 aa		21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	LY6G5C	Q5SRR4	150 aa		21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	LRRC8E	Q6NSJ5	796 aa		21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	RNF135	Q8IUD6	432 aa		21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	LMNTD2	Q8IXW0	634 aa		21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	PEX13	Q92968	403 aa		21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	NSUN3	Q9H649	340 aa	Known RBP	21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	LHX3	Q9UBR4	397 aa		21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	RAP2C	Q9Y3L5	183 aa		21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296		F8W8V4	182 aa		21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	PHGDH	O43175	533 aa	Known RBP	21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	PGM1	P36871	562 aa		21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	LEPR	P48357	1165 aa	Known RBP	21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	KPNA2	P52292	529 aa	Known RBP	21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	TMEM184A	Q6ZMB5	413 aa		21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	GPR149	Q86SP6	731 aa		21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	PDCD6IP	Q8WUM4	868 aa	Known RBP	21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	RMDN1	Q96DB5	314 aa		21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	TDRD1	Q9BXT4	1180 aa	Known RBP	21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	ADGRE3	Q9BY15	652 aa		21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	MARK1	Q9P0L2	795 aa		21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	RUVBL2	Q9Y230	463 aa	Known RBP	21.18	■□□□□ 0.98
FGFR1-223	ENST00000496296	ATG2A	Q2TAZ0	1938 aa		21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	SLC7A4	O43246	635 aa		21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	TM7SF2	O76062	418 aa		21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	HLA-F	P30511	346 aa		21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	CPOX	P36551	454 aa		21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	MAPK8	P45983	427 aa		21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	CLCN5	P51795	746 aa		21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	AP1S1	P61966	158 aa		21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	ASPH	Q12797	758 aa		21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	UBAP2L	Q14157	1087 aa	Known RBP	21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	RCN2	Q14257	317 aa		21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	GALNT3	Q14435	633 aa		21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	ZNF470	Q6ECI4	717 aa		21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	NCEH1	Q6PIU2	408 aa		21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	CEP97	Q8IW35	865 aa		21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	NPAS3	Q8IXF0	933 aa		21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	ZNF781	Q8N8C0	355 aa		21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	TTC8	Q8TAM2	541 aa		21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	KCTD4	Q8WVF5	259 aa		21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	TRIB3	Q96RU7	358 aa		21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	ILKAP	Q9H0C8	392 aa	Predicted RBP	21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	DUS2	Q9NX74	493 aa	Known RBP	21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	RAI2	Q9Y5P3	530 aa		21.17	■□□□□ 0.98
FGFR1-223	ENST00000496296	ENTPD5	O75356	428 aa		21.16	■□□□□ 0.98
FGFR1-223	ENST00000496296	MT-CO1	P00395	513 aa		21.16	■□□□□ 0.98
FGFR1-223	ENST00000496296	ACVR1	Q04771	509 aa		21.16	■□□□□ 0.98
FGFR1-223	ENST00000496296	DMC1	Q14565	340 aa		21.16	■□□□□ 0.98
FGFR1-223	ENST00000496296	FSTL5	Q8N475	847 aa	Predicted RBP	21.16	■□□□□ 0.98
FGFR1-223	ENST00000496296	LMLN	Q96KR4	655 aa		21.16	■□□□□ 0.98
FGFR1-223	ENST00000496296	MYCBP	Q99417	103 aa	Predicted RBP	21.16	■□□□□ 0.98
FGFR1-223	ENST00000496296	SLC2A11	Q9BYW1	496 aa		21.16	■□□□□ 0.98
FGFR1-223	ENST00000496296	MFSD1	Q9H3U5	465 aa		21.16	■□□□□ 0.98
FGFR1-223	ENST00000496296	GDE1	Q9NZC3	331 aa		21.16	■□□□□ 0.98
FGFR1-223	ENST00000496296	SLC25A13	Q9UJS0	675 aa		21.16	■□□□□ 0.98
FGFR1-223	ENST00000496296	INTS6	Q9UL03	887 aa	Known RBP	21.16	■□□□□ 0.98
FGFR1-223	ENST00000496296	RIMKLB	Q9ULI2	386 aa		21.16	■□□□□ 0.98
FGFR1-223	ENST00000496296	CHD7	Q9P2D1	2997 aa		21.16	■□□□□ 0.98
FGFR1-223	ENST00000496296	SLCO1B7	G3V0H7	640 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	TK2	O00142	265 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	MATN2	O00339	956 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	PABPC1	P11940	636 aa	Known RBP	21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	TAS2R39	P59534	338 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	DNAJB13	P59910	316 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	SULT2A1	Q06520	285 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	CMPK2	Q5EBM0	449 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	NET1	Q7Z628	596 aa	Predicted RBP	21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	EFHB	Q8N7U6	833 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	OR13J1	Q8NGT2	312 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	BRSK1	Q8TDC3	778 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	BLOC1S5	Q8TDH9	187 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	OSCP1	Q8WVF1	389 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	FGF13	Q92913	245 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	SMARCD2	Q92925	531 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	APOL5	Q9BWW9	433 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	COG4	Q9H9E3	785 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	21.15	■□□□□ 0.98	1e-9	■■■■■ 30.8
FGFR1-223	ENST00000496296	PCDHGC4	Q9Y5F7	938 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	CHD9	Q3L8U1	2897 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296		K7ERQ8	282 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	NPHS1	O60500	1241 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	SERPINB5	P36952	375 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	DLG1	Q12959	904 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	PRKAA1	Q13131	559 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	FUT11	Q495W5	492 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	KHDC1	Q4VXA5	237 aa	Known RBP	21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	FAM78A	Q5JUQ0	283 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	ANKRD54	Q6NXT1	300 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	GET4	Q7L5D6	327 aa	Predicted RBP	21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	FBXO27	Q8NI29	283 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	BPIFB1	Q8TDL5	484 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	ASB16	Q96NS5	453 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	OMD	Q99983	421 aa		21.15	■□□□□ 0.98
FGFR1-223	ENST00000496296	MRPL57	Q9BQC6	102 aa	Known RBP	21.15	■□□□□ 0.98

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms