RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 HJURPQ8NCD3 748 aaPredicted RBP3.82□□□□□ -1.8
CLK1-214ENST00000496205 ARRDC2Q8TBH0 407 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 NEUROG1Q92886 237 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 MIB2Q96AX9 1013 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 ARHGEF26Q96DR7 871 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 RSPH9Q9H1X1 276 aaPredicted RBP3.82□□□□□ -1.8
CLK1-214ENST00000496205 CDT1Q9H211 546 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 KCNN2Q9H2S1 579 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 RANGRFQ9HD47 186 aaPredicted RBP3.82□□□□□ -1.8
CLK1-214ENST00000496205 PDE7BQ9NP56 450 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 ANKRD10Q9NXR5 420 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 NKIRAS2Q9NYR9 191 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 DLGAP2Q9P1A6 1054 aa3.82□□□□□ -1.8
CLK1-214ENST00000496205 A0A1W2PR77 199 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 SYNDIG1LA6NDD5 238 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 B4DLN1 442 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 J3KR12 359 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 NTN3O00634 580 aaPredicted RBP3.81□□□□□ -1.8
CLK1-214ENST00000496205 IPO7O95373 1038 aaKnown RBP3.81□□□□□ -1.8
CLK1-214ENST00000496205 IFNA2P01563 188 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 DNTTP04053 509 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 RB1P06400 928 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 CYC1P08574 325 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 HOXB5P09067 269 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 IRF1P10914 325 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 IL11P20809 199 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 PIGAP37287 484 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 CDH12P55289 794 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 P2RX3P56373 397 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 PPATQ06203 517 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 EPS8Q12929 822 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 DRAP1Q14919 205 aaPredicted RBP3.81□□□□□ -1.8
CLK1-214ENST00000496205 NFATC4Q14934 902 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 DUSP6Q16828 381 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 TCTN1Q2MV58 587 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 MMEL1Q495T6 779 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 LRIF1Q5T3J3 769 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 TMEM198Q66K66 360 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 FBXL22Q6P050 247 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 PDXDC1Q6P996 788 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 GLDNQ6ZMI3 551 aaPredicted RBP3.81□□□□□ -1.8
CLK1-214ENST00000496205 SLC16A12Q6ZSM3 486 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 DENND5BQ6ZUT9 1274 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 RPAP2Q8IXW5 612 aaPredicted RBP3.81□□□□□ -1.8
CLK1-214ENST00000496205 ZCCHC9Q8N567 271 aaKnown RBP3.81□□□□□ -1.8
CLK1-214ENST00000496205 TEX45Q8NA69 505 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 IL17RCQ8NAC3 791 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 NEXN-AS1Q8NBZ9 246 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 OR14L1PQ8NHC6 308 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 TMEM174Q8WUU8 243 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 IGSF8Q969P0 613 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 WBP1Q96G27 269 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 ESRP2Q9H6T0 727 aaKnown RBP3.81□□□□□ -1.8
CLK1-214ENST00000496205 CLK4Q9HAZ1 481 aaKnown RBP3.81□□□□□ -1.8
CLK1-214ENST00000496205 BPIFA1Q9NP55 256 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 RRP7BPQ9NSQ0 103 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 WSB2Q9NYS7 404 aaPredicted RBP3.81□□□□□ -1.8
CLK1-214ENST00000496205 SUCLA2Q9P2R7 463 aaPredicted RBP3.81□□□□□ -1.8
CLK1-214ENST00000496205 ERRFI1Q9UJM3 462 aaPredicted RBP3.81□□□□□ -1.8
CLK1-214ENST00000496205 PADI1Q9ULC6 663 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 AAR2Q9Y312 384 aaKnown RBP3.81□□□□□ -1.8
CLK1-214ENST00000496205 NFE2L3Q9Y4A8 694 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 CEPT1Q9Y6K0 416 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 SLC4A4Q9Y6R1 1079 aa3.81□□□□□ -1.8
CLK1-214ENST00000496205 EVPLQ92817 2033 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 C1orf226A1L170 272 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 PLOD3O60568 738 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 MMP2P08253 660 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 TFPIP10646 304 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 FGF3P11487 239 aaPredicted RBP3.8□□□□□ -1.8
CLK1-214ENST00000496205 EIF2DP41214 584 aaKnown RBP3.8□□□□□ -1.8
CLK1-214ENST00000496205 PMS2P54278 862 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 HILS1P60008 231 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 SORDQ00796 357 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 GOLGA8DPQ0D2H9 430 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 STK4Q13043 487 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 ARHGEF6Q15052 776 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 PLEKHS1Q5SXH7 462 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 SARM1Q6SZW1 724 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 Q6ZSV7 163 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 SEPT14Q6ZU15 432 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 MTSS1LQ765P7 747 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 CTU1Q7Z7A3 348 aaKnown RBP3.8□□□□□ -1.8
CLK1-214ENST00000496205 ANKRD23Q86SG2 305 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 AACSQ86V21 672 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 SPATA2LQ8IUW3 424 aaPredicted RBP3.8□□□□□ -1.8
CLK1-214ENST00000496205 MB21D2Q8IYB1 491 aaPredicted RBP3.8□□□□□ -1.8
CLK1-214ENST00000496205 TMEM255BQ8WV15 326 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 FBXL8Q96CD0 374 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 SLC41A2Q96JW4 573 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 APOLD1Q96LR9 279 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 OR2A14Q96R47 310 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 ABHD1Q96SE0 405 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 SLF1Q9BQI6 1058 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 SH2D4AQ9H788 454 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 MKKSQ9NPJ1 570 aaPredicted RBP3.8□□□□□ -1.8
CLK1-214ENST00000496205 CYSLTR2Q9NS75 346 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 DECR2Q9NUI1 292 aa3.8□□□□□ -1.8
CLK1-214ENST00000496205 CISD1Q9NZ45 108 aaKnown RBP3.8□□□□□ -1.8
CLK1-214ENST00000496205 NENFQ9UMX5 172 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms