RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 AXIN1O15169 862 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 LTA4HP09960 611 aaKnown RBP15.37■□□□□ 0.05
SDF4-207ENST00000494748 NPR3P17342 541 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 FOXA1P55317 472 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 GJC2Q5T442 439 aaPredicted RBP15.37■□□□□ 0.05
SDF4-207ENST00000494748 KIAA0930Q6ICG6 404 aaPredicted RBP15.37■□□□□ 0.05
SDF4-207ENST00000494748 GPRIN1Q7Z2K8 1008 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 PGAP3Q96FM1 320 aaPredicted RBP15.37■□□□□ 0.05
SDF4-207ENST00000494748 CORO1BQ9BR76 489 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 MTG1Q9BT17 334 aaPredicted RBP15.37■□□□□ 0.05
SDF4-207ENST00000494748 LHPPQ9H008 270 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 NDUFAF1Q9Y375 327 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 ANKRD36A6QL64 1941 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 UPK1AO00322 258 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 CLPXO76031 633 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 LGALS2P05162 132 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 DPEP1P16444 411 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 MARCH8Q5T0T0 291 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 AFAP1L2Q8N4X5 818 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 ZNF513Q8N8E2 541 aaPredicted RBP15.37■□□□□ 0.05
SDF4-207ENST00000494748 BEST2Q8NFU1 509 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 GLT1D1Q96MS3 346 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 FICDQ9BVA6 458 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 NTN4Q9HB63 628 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 TMEM30AQ9NV96 361 aa15.37■□□□□ 0.05
SDF4-207ENST00000494748 INTS10Q9NVR2 710 aaKnown RBP15.37■□□□□ 0.05
SDF4-207ENST00000494748 OAS3Q9Y6K5 1087 aaKnown RBP15.37■□□□□ 0.05
SDF4-207ENST00000494748 LRIG2O94898 1065 aa15.36■□□□□ 0.05
SDF4-207ENST00000494748 NCAM1P13591 858 aa15.36■□□□□ 0.05
SDF4-207ENST00000494748 KPNA2P52292 529 aaKnown RBP15.36■□□□□ 0.05
SDF4-207ENST00000494748 ARHGAP1Q07960 439 aa15.36■□□□□ 0.05
SDF4-207ENST00000494748 AQP6Q13520 282 aa15.36■□□□□ 0.05
SDF4-207ENST00000494748 OXA1LQ15070 435 aa15.36■□□□□ 0.05
SDF4-207ENST00000494748 RGS21Q2M5E4 152 aa15.36■□□□□ 0.05
SDF4-207ENST00000494748 DCAF4L1Q3SXM0 396 aa15.36■□□□□ 0.05
SDF4-207ENST00000494748 PNPT1Q8TCS8 783 aaKnown RBP15.36■□□□□ 0.05
SDF4-207ENST00000494748 MAGEE2Q8TD90 523 aaPredicted RBP15.36■□□□□ 0.05
SDF4-207ENST00000494748 FCRL5Q96RD9 977 aa15.36■□□□□ 0.05
SDF4-207ENST00000494748 USP22Q9UPT9 525 aa15.36■□□□□ 0.05
SDF4-207ENST00000494748 FAM32AQ9Y421 112 aaKnown RBP15.36■□□□□ 0.05
SDF4-207ENST00000494748 CFAP99D6REC4 459 aa15.36■□□□□ 0.05
SDF4-207ENST00000494748 KCNH1O95259 989 aa15.36■□□□□ 0.05
SDF4-207ENST00000494748 MATN4O95460 622 aa15.36■□□□□ 0.05
SDF4-207ENST00000494748 HTR1AP08908 422 aa15.36■□□□□ 0.05
SDF4-207ENST00000494748 NCK1P16333 377 aa15.36■□□□□ 0.05
SDF4-207ENST00000494748 GSK3BP49841 420 aa15.36■□□□□ 0.05
SDF4-207ENST00000494748 SOX4Q06945 474 aaPredicted RBP15.36■□□□□ 0.05
SDF4-207ENST00000494748 ACAP2Q15057 778 aa15.36■□□□□ 0.05
SDF4-207ENST00000494748 MAP7D1Q3KQU3 841 aa15.36■□□□□ 0.05
SDF4-207ENST00000494748 ISCA2Q86U28 154 aa15.36■□□□□ 0.05
SDF4-207ENST00000494748 ITIH5Q86UX2 942 aa15.36■□□□□ 0.05
SDF4-207ENST00000494748 IPMKQ8NFU5 416 aa15.36■□□□□ 0.05
SDF4-207ENST00000494748 SDR39U1Q9NRG7 319 aaPredicted RBP15.36■□□□□ 0.05
SDF4-207ENST00000494748 KRBA1A5PL33 1030 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 TXNP10599 105 aaKnown RBP15.35■□□□□ 0.05
SDF4-207ENST00000494748 EN1Q05925 392 aaPredicted RBP15.35■□□□□ 0.05
SDF4-207ENST00000494748 FXNQ16595 210 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 CYP51A1Q16850 503 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 AGAP9Q5VTM2 703 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 PM20D1Q6GTS8 502 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 SLC16A12Q6ZSM3 486 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 ARHGAP12Q8IWW6 846 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 PPHLN1Q8NEY8 458 aaKnown RBP15.35■□□□□ 0.05
SDF4-207ENST00000494748 PTERQ96BW5 349 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 MUS81Q96NY9 551 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 ALPK1Q96QP1 1244 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 TRMOQ9BU70 441 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 NXF3Q9H4D5 531 aaKnown RBP15.35■□□□□ 0.05
SDF4-207ENST00000494748 H0YAE9 185 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 PSMD3O43242 534 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 IGFBP6P24592 240 aaPredicted RBP15.35■□□□□ 0.05
SDF4-207ENST00000494748 HRH2P25021 359 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 LEPRP48357 1165 aaKnown RBP15.35■□□□□ 0.05
SDF4-207ENST00000494748 CDKN2DP55273 166 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 DAOAP59103 153 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 NFKB2Q00653 900 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 RABL3Q5HYI8 236 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 TMEM53Q6P2H8 277 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 PTCD2Q8WV60 388 aaKnown RBP15.35■□□□□ 0.05
SDF4-207ENST00000494748 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.35■□□□□ 0.05
SDF4-207ENST00000494748 IL12RB2Q99665 862 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 HEPHQ9BQS7 1158 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 ULBP1Q9BZM6 244 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 GOLGA2P5Q9HBQ8 144 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 SYNCRIPO60506 623 aaKnown RBP15.35■□□□□ 0.05
SDF4-207ENST00000494748 CAPN15O75808 1086 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 CDK14O94921 469 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 MT-ND1P03886 318 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 OPRL1P41146 370 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 NOMO2Q5JPE7 1267 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 BLOC1S3Q6QNY0 202 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 RIMKLAQ8IXN7 391 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 BPIFB1Q8TDL5 484 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 TEX37Q96LM6 180 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 ZNF641Q96N77 438 aaPredicted RBP15.35■□□□□ 0.05
SDF4-207ENST00000494748 CYP2S1Q96SQ9 504 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 C1orf50Q9BV19 199 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 OR12D3Q9UGF7 316 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 PSME2Q9UL46 239 aa15.35■□□□□ 0.05
SDF4-207ENST00000494748 AAR2Q9Y312 384 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms