RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 FBXO2Q9UK22 296 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-219ENST00000494323 SH3BP1Q9Y3L3 701 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 NEUROG3Q9Y4Z2 214 aa5.41□□□□□ -1.54
PTCD3-219ENST00000494323 SRPRBQ9Y5M8 271 aaKnown RBP5.41□□□□□ -1.54
PTCD3-219ENST00000494323 TNRC6BQ9UPQ9 1833 aaKnown RBP5.4□□□□□ -1.54
PTCD3-219ENST00000494323 IGHV1OR15-9A0A0B4J2B8 117 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 A0A1W2PQF6 199 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.4□□□□□ -1.54
PTCD3-219ENST00000494323 PRRT4C9JH25 899 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 PJA2O43164 708 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 PHGDHO43175 533 aaKnown RBP5.4□□□□□ -1.54
PTCD3-219ENST00000494323 TACC1O75410 805 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 BEST1O76090 585 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 HOXB2P14652 356 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 NTSR1P30989 418 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 EIF2DP41214 584 aaKnown RBP5.4□□□□□ -1.54
PTCD3-219ENST00000494323 STAT6P42226 847 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 CYP2J2P51589 502 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 TNNC1P63316 161 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 SCAPQ12770 1279 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 TRPC3Q13507 836 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 FGL2Q14314 439 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 NUMA1Q14980 2115 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 KRT72Q14CN4 511 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 SNRNP35Q16560 246 aaKnown RBP5.4□□□□□ -1.54
PTCD3-219ENST00000494323 AFMIDQ63HM1 303 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 TCTN3Q6NUS6 607 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 CCDC73Q6ZRK6 1079 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 PAQR9Q6ZVX9 377 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 DOK3Q7L591 496 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 POLNQ7Z5Q5 900 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 ACOT1Q86TX2 421 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 MARCH9Q86YJ5 346 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 CCDC65Q8IXS2 484 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 OR2C3Q8N628 320 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 CEP76Q8TAP6 659 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 IPO4Q8TEX9 1081 aaKnown RBP5.4□□□□□ -1.54
PTCD3-219ENST00000494323 STON2Q8WXE9 905 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 TMEM176AQ96HP8 235 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 ZNF419Q96HQ0 510 aaPredicted RBP5.4□□□□□ -1.54
PTCD3-219ENST00000494323 CEP295NLQ96MC4 621 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 TRIM9Q9C026 710 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 NACA2Q9H009 215 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 SPHK2Q9NRA0 654 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 OLFML3Q9NRN5 406 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 DNAJC17Q9NVM6 304 aaKnown RBP5.4□□□□□ -1.54
PTCD3-219ENST00000494323 PLK2Q9NYY3 685 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 ZFR2Q9UPR6 939 aaKnown RBP5.4□□□□□ -1.54
PTCD3-219ENST00000494323 CLCA2Q9UQC9 943 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.4□□□□□ -1.54
PTCD3-219ENST00000494323 ACTL7AQ9Y615 435 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 RAD54BQ9Y620 910 aa5.4□□□□□ -1.54
PTCD3-219ENST00000494323 SHROOM3Q8TF72 1996 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 FRMD3A2A2Y4 597 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 NEDD8-MDP1E9PL57 170 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 H0Y626 953 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 H3BUI4 141 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 KPNA5O15131 536 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 GPR42O15529 346 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 TGFB1I1O43294 461 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 ZNF217O75362 1048 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 TCEA3O75764 348 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 STC2O76061 302 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 IPO13O94829 963 aaKnown RBP5.39□□□□□ -1.55
PTCD3-219ENST00000494323 RTN3O95197 1032 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-219ENST00000494323 TRIM16O95361 564 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 FAM163BP0C2L3 166 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 CISD3P0C7P0 127 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 FTH1P19P0C7X4 201 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 SETSIPP0DME0 302 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 RAP2AP10114 183 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 CASP1P29466 404 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 MSX2P35548 267 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-219ENST00000494323 DPP6P42658 865 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 CASP4P49662 377 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 HHEXQ03014 270 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 ALCAMQ13740 583 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 SLC39A14Q15043 492 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 ZXDCQ2QGD7 858 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-219ENST00000494323 FAM214AQ32MH5 1076 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 SOWAHCQ53LP3 525 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-219ENST00000494323 CCDC157Q569K6 752 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 SNX30Q5VWJ9 437 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 KIAA1324Q6UXG2 1013 aaKnown RBP5.39□□□□□ -1.55
PTCD3-219ENST00000494323 SLC36A4Q6YBV0 504 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 HTR3DQ70Z44 454 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 GGNQ86UU5 652 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 FAM90A1Q86YD7 464 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 WDR49Q8IV35 697 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 NELFCDQ8IXH7 590 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 FUKQ8N0W3 1084 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 D2HGDHQ8N465 521 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 TERB1Q8NA31 727 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 B3GALNT2Q8NCR0 500 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 VPS37AQ8NEZ2 397 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 SETD7Q8WTS6 366 aaKnown RBP5.39□□□□□ -1.55
PTCD3-219ENST00000494323 OTUB2Q96DC9 234 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 MTFMTQ96DP5 389 aaKnown RBP5.39□□□□□ -1.55
PTCD3-219ENST00000494323 CCDC138Q96M89 665 aa5.39□□□□□ -1.55
PTCD3-219ENST00000494323 RBM15Q96T37 977 aaKnown RBP eCLIP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms