RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 RAD18Q9NS91 495 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 CDV3Q9UKY7 258 aaKnown RBP12.46□□□□□ -0.41
TRA2A-209ENST00000494255 CACNA1EQ15878 2313 aa12.46□□□□□ -0.41
TRA2A-209ENST00000494255 EP300Q09472 2414 aaPredicted RBP12.46□□□□□ -0.42
TRA2A-209ENST00000494255 RIF1Q5UIP0 2472 aaKnown RBP12.45□□□□□ -0.42
TRA2A-209ENST00000494255 RGSL1A5PLK6 1076 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 USP12O75317 370 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 AP2A1O95782 977 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 GAS8O95995 478 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 ZSCAN5DPP0CG00 497 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 TSHRP16473 764 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 ARRB1P49407 418 aaPredicted RBP12.45□□□□□ -0.42
TRA2A-209ENST00000494255 PDE1CQ14123 709 aaPredicted RBP12.45□□□□□ -0.42
TRA2A-209ENST00000494255 INPP5AQ14642 412 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 CDKN3Q16667 212 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 ZNF423Q2M1K9 1284 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 UAP1L1Q3KQV9 507 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 KCTD11Q693B1 232 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 RAET1GQ6H3X3 334 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 ESRP1Q6NXG1 681 aaKnown RBP12.45□□□□□ -0.42
TRA2A-209ENST00000494255 PNCKQ6P2M8 343 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 TTC27Q6P3X3 843 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 NYAP1Q6ZVC0 841 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 GLT6D1Q7Z4J2 308 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 SPATS2Q86XZ4 545 aaKnown RBP12.45□□□□□ -0.42
TRA2A-209ENST00000494255 CREG2Q8IUH2 290 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 GLIS1Q8NBF1 620 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 OR2I1PQ8NGU4 316 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 AP2M1Q96CW1 435 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 APOOQ9BUR5 198 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 CDH19Q9H159 772 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 ERVMER34-1Q9H9K5 563 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 CD84Q9UIB8 345 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 SPO11Q9Y5K1 396 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 TMEM131Q92545 1883 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 C4orf47A7E2U8 309 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 CACNB4O00305 520 aaPredicted RBP12.45□□□□□ -0.42
TRA2A-209ENST00000494255 CDX4O14627 284 aaPredicted RBP12.45□□□□□ -0.42
TRA2A-209ENST00000494255 FANCGO15287 622 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 YKT6O15498 198 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 KRT14P02533 472 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 PYGLP06737 847 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 SDHBP21912 280 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 HTR1BP28222 390 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 GPR1P46091 355 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 SPINT3P49223 89 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 CCT8P50990 548 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 LIMK1P53667 647 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 BASP1P80723 227 aaKnown RBP12.45□□□□□ -0.42
TRA2A-209ENST00000494255 DPTQ07507 201 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 OLIG2Q13516 323 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 SEMA5AQ13591 1074 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 PPP1R21Q6ZMI0 780 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 RFLNAQ6ZTI6 216 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 TMC3Q7Z5M5 1100 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 PLA2G15Q8NCC3 412 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 ELF4Q99607 663 aaPredicted RBP12.45□□□□□ -0.42
TRA2A-209ENST00000494255 ABCG8Q9H221 673 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 FAM83DQ9H4H8 585 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 WDR26Q9H7D7 661 aa12.45□□□□□ -0.42
TRA2A-209ENST00000494255 DNAAF2Q9NVR5 837 aaKnown RBP12.45□□□□□ -0.42
TRA2A-209ENST00000494255 PTPRZ1P23471 2315 aaPredicted RBP12.44□□□□□ -0.42
TRA2A-209ENST00000494255 SPTY2D1-AS1A0A0U1RR47 76 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 PDE2AO00408 941 aaPredicted RBP12.44□□□□□ -0.42
TRA2A-209ENST00000494255 ECEL1O95672 775 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 TUBB4AP04350 444 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 APRTP07741 180 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 ZNF883P0CG24 379 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 NFATC4Q14934 902 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 TRIP13Q15645 432 aaPredicted RBP12.44□□□□□ -0.42
TRA2A-209ENST00000494255 KDM7AQ6ZMT4 941 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 MACC1Q6ZN28 852 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 NLRP8Q86W28 1048 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 PARGQ86W56 976 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 SLC22A18ASQ8N1D0 253 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 TTC30BQ8N4P2 665 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 SCAMP4Q969E2 229 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 RUNDC3BQ96NL0 473 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 RIOK2Q9BVS4 552 aaKnown RBP12.44□□□□□ -0.42
TRA2A-209ENST00000494255 IL21RQ9HBE5 538 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 ARNT2Q9HBZ2 717 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 PHPT1Q9NRX4 125 aaPredicted RBP12.44□□□□□ -0.42
TRA2A-209ENST00000494255 GPR27Q9NS67 375 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 TM7SF3Q9NS93 570 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 DNAJC28Q9NX36 388 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.44□□□□□ -0.42
TRA2A-209ENST00000494255 FNDC3AQ9Y2H6 1198 aaKnown RBP12.44□□□□□ -0.42
TRA2A-209ENST00000494255 PKP3Q9Y446 797 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 OR1A2Q9Y585 309 aa12.44□□□□□ -0.42
TRA2A-209ENST00000494255 A0A1B0GTQ1 180 aa12.43□□□□□ -0.42
TRA2A-209ENST00000494255 C2orf81A6NN90 581 aa12.43□□□□□ -0.42
TRA2A-209ENST00000494255 CCDC188H7C350 402 aa12.43□□□□□ -0.42
TRA2A-209ENST00000494255 KIF2AO00139 706 aaPredicted RBP12.43□□□□□ -0.42
TRA2A-209ENST00000494255 KELP23276 732 aa12.43□□□□□ -0.42
TRA2A-209ENST00000494255 TEAD1P28347 426 aa12.43□□□□□ -0.42
TRA2A-209ENST00000494255 HMGCLP35914 325 aa12.43□□□□□ -0.42
TRA2A-209ENST00000494255 TRIM23P36406 574 aa12.43□□□□□ -0.42
TRA2A-209ENST00000494255 VPS41P49754 854 aa12.43□□□□□ -0.42
TRA2A-209ENST00000494255 KIAA1024LP59773 190 aa12.43□□□□□ -0.42
TRA2A-209ENST00000494255 DCDC1P59894 354 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms