RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 CCKBRP32239 447 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 THPOP40225 353 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 NNMTP40261 264 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 HARS2P49590 506 aaKnown RBP2.43□□□□□ -2.02
LMNB1-207ENST00000494185 PMS2P54278 862 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 RRP1P56182 461 aaKnown RBP2.43□□□□□ -2.02
LMNB1-207ENST00000494185 LINC00205P59089 165 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 ZBED6P86452 979 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 Q0VFX4 171 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 CDC16Q13042 620 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 STK4Q13043 487 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 TRAF1Q13077 416 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 DCTN2Q13561 401 aaKnown RBP2.43□□□□□ -2.02
LMNB1-207ENST00000494185 TNFAIP1Q13829 316 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 KEAP1Q14145 624 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 MYBPC2Q14324 1141 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 HSPB2Q16082 182 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 GSTA3Q16772 222 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 KRT24Q2M2I5 525 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 PRAMEF19Q5SWL8 479 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 NAA16Q6N069 864 aaPredicted RBP2.43□□□□□ -2.02
LMNB1-207ENST00000494185 TMEM154Q6P9G4 183 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 NCEH1Q6PIU2 408 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 SARM1Q6SZW1 724 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 CCNI2Q6ZMN8 369 aaPredicted RBP2.43□□□□□ -2.02
LMNB1-207ENST00000494185 IKBIPQ70UQ0 350 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 SHFQ7M4L6 423 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 SLC46A3Q7Z3Q1 461 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 ADGRF2Q8IZF7 708 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 PELI3Q8N2H9 469 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 TTC39CQ8N584 583 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 PARP16Q8N5Y8 322 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 GJC3Q8NFK1 279 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 BEST2Q8NFU1 509 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 B4GALNT2Q8NHY0 566 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 KCNG4Q8TDN1 519 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 NUDCD2Q8WVJ2 157 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 DNAAF4Q8WXU2 420 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 NEUROG1Q92886 237 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 FAM149B1Q96BN6 582 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 CALML4Q96GE6 196 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 FAM84BQ96KN1 310 aaPredicted RBP2.43□□□□□ -2.02
LMNB1-207ENST00000494185 KXD1Q9BQD3 176 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 LBHD1Q9BQE6 289 aaPredicted RBP2.43□□□□□ -2.02
LMNB1-207ENST00000494185 MXRA8Q9BRK3 442 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 MSTO1Q9BUK6 570 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 IFIH1Q9BYX4 1025 aaKnown RBP2.43□□□□□ -2.02
LMNB1-207ENST00000494185 SLCO5A1Q9H2Y9 848 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 LIMA1Q9UHB6 759 aaKnown RBP2.43□□□□□ -2.02
LMNB1-207ENST00000494185 SLCO3A1Q9UIG8 710 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 A4GNTQ9UNA3 340 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 VDAC3Q9Y277 283 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 ZNF711Q9Y462 761 aa2.43□□□□□ -2.02
LMNB1-207ENST00000494185 IGLV5-37A0A075B6J1 123 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 A0A0U1RQF3 1178 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 A0A1B0GVT2 93 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 LINC01553A4QN01 128 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 INAFM1C9JVW0 142 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 USP17L23D6RBM5 183 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 PTGES3LE9PB15 166 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 LDLRAD4O15165 306 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 TGFB1I1O43294 461 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 ERAL1O75616 437 aaKnown RBP2.42□□□□□ -2.02
LMNB1-207ENST00000494185 BEST1O76090 585 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 RGS11O94810 467 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 TFP02787 698 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 EDN2P20800 178 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 STX2P32856 288 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 ACSL1P33121 698 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 CPOXP36551 454 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 HADHAP40939 763 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 RFX5P48382 616 aaPredicted RBP2.42□□□□□ -2.02
LMNB1-207ENST00000494185 CXCR3P49682 368 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 GNAQP50148 359 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 EFNA5P52803 228 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 CLDN2P57739 230 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 DSCR9P59020 149 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 TUBA1BP68363 451 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 PRAMEP78395 509 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 IFI35P80217 286 aaPredicted RBP2.42□□□□□ -2.02
LMNB1-207ENST00000494185 RPL36AP83881 106 aaKnown RBP2.42□□□□□ -2.02
LMNB1-207ENST00000494185 TFAP4Q01664 338 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 TROAPQ12815 778 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 SNTA1Q13424 505 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 HNF4GQ14541 408 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 CRYMQ14894 314 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 NFATC4Q14934 902 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 RASA2Q15283 850 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 RNPS1Q15287 305 aaKnown RBP2.42□□□□□ -2.02
LMNB1-207ENST00000494185 KIF19Q2TAC6 998 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 ACCSLQ4AC99 568 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 ATP13A5Q4VNC0 1218 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 ZNF585BQ52M93 769 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 ESCO2Q56NI9 601 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 HECTD3Q5T447 861 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 TXNDC8Q6A555 127 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 ZNF324BQ6AW86 544 aaPredicted RBP2.42□□□□□ -2.02
LMNB1-207ENST00000494185 GPR139Q6DWJ6 353 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 LRRC8EQ6NSJ5 796 aa2.42□□□□□ -2.02
LMNB1-207ENST00000494185 RPUSD3Q6P087 351 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms