RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ZFP42Q96MM3 310 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 NDNQ99608 321 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 C19orf43Q9BQ61 176 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 APOL2Q9BQE5 337 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 CCDC68Q9H2F9 335 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 MTIF3Q9H2K0 278 aaKnown RBP11.5□□□□□ -0.57
RFC4-214ENST00000494047 COPS7BQ9H9Q2 264 aaPredicted RBP11.5□□□□□ -0.57
RFC4-214ENST00000494047 TMPRSS4Q9NRS4 437 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 CD300AQ9UGN4 299 aa11.5□□□□□ -0.57
RFC4-214ENST00000494047 A0A087WXM4 84 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 A0A0U1RQF3 1178 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 EIF4E1BA6NMX2 242 aaKnown RBP11.49□□□□□ -0.57
RFC4-214ENST00000494047 STX16-NPEPL1H3BU86 382 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 I6L893 689 aaPredicted RBP11.49□□□□□ -0.57
RFC4-214ENST00000494047 STX16O14662 325 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 SYN3O14994 580 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 PMPCBO75439 489 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 B3GAT3O94766 335 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 WISP3O95389 354 aaPredicted RBP11.49□□□□□ -0.57
RFC4-214ENST00000494047 FDXRP22570 491 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 AVPR1AP37288 418 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 NUP107P57740 925 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 YWHAHQ04917 246 aaPredicted RBP11.49□□□□□ -0.57
RFC4-214ENST00000494047 TIGD5Q53EQ6 642 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 AGKQ53H12 422 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 AARS2Q5JTZ9 985 aaKnown RBP11.49□□□□□ -0.57
RFC4-214ENST00000494047 PPM1LQ5SGD2 360 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 TMTC4Q5T4D3 741 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 PPP4R4Q6NUP7 873 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 FBXL19Q6PCT2 694 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 ATG14Q6ZNE5 492 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 LARP4Q71RC2 724 aaKnown RBP eCLIP11.49□□□□□ -0.57
RFC4-214ENST00000494047 ERMP1Q7Z2K6 904 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 SERINC5Q86VE9 423 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 CHERPQ8IWX8 916 aaKnown RBP11.49□□□□□ -0.57
RFC4-214ENST00000494047 NKAPQ8N5F7 415 aaKnown RBP11.49□□□□□ -0.57
RFC4-214ENST00000494047 STAG3L4Q8TBR4 150 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 AGR3Q8TD06 166 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 TADA1Q96BN2 335 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 SLC39A13Q96H72 371 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 BIRC8Q96P09 236 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 C1QTNF3Q9BXJ4 246 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 SIK2Q9H0K1 926 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 CLK4Q9HAZ1 481 aaKnown RBP11.49□□□□□ -0.57
RFC4-214ENST00000494047 IL23AQ9NPF7 189 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 ANLNQ9NQW6 1124 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 RGS18Q9NS28 235 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 RIC8BQ9NVN3 520 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 ACTR3BQ9P1U1 418 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 AK5Q9Y6K8 562 aa11.49□□□□□ -0.57
RFC4-214ENST00000494047 NUP205Q92621 2012 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 DOCK4Q8N1I0 1966 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 LOC285095A0A1B0GVY8 99 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 TNFRSF10BO14763 440 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 AZIN1O14977 448 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 KERAO60938 352 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 RPP40O75818 363 aaKnown RBP11.48□□□□□ -0.57
RFC4-214ENST00000494047 ZMPSTE24O75844 475 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 BMP10O95393 424 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 MT-CYBP00156 380 aaPredicted RBP11.48□□□□□ -0.57
RFC4-214ENST00000494047 ZNF26P17031 533 aaPredicted RBP11.48□□□□□ -0.57
RFC4-214ENST00000494047 LBPP18428 481 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 FASP25445 335 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 ETFBP38117 255 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 GRIK1P39086 918 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 NME5P56597 212 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 TBX4P57082 545 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 EPS8Q12929 822 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 LCP2Q13094 533 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 SHHQ15465 462 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 TRIP4Q15650 581 aaPredicted RBP11.48□□□□□ -0.57
RFC4-214ENST00000494047 TYSND1Q2T9J0 566 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 KIF19Q2TAC6 998 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 FAM109BQ6ICB4 259 aaPredicted RBP11.48□□□□□ -0.57
RFC4-214ENST00000494047 AFTPHQ6ULP2 937 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 CARM1Q86X55 608 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 PROSER1Q86XN7 944 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 TP53INP2Q8IXH6 220 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 TRIML2Q8N7C3 387 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 PHC3Q8NDX5 983 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 TSPAN14Q8NG11 270 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 SPATA22Q8NHS9 363 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 ZNF420Q8TAQ5 688 aaPredicted RBP11.48□□□□□ -0.57
RFC4-214ENST00000494047 MIPOL1Q8TD10 442 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 BRSK1Q8TDC3 778 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 USP33Q8TEY7 942 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 C2orf15Q8WU43 125 aaKnown RBP11.48□□□□□ -0.57
RFC4-214ENST00000494047 CNBD2Q96M20 576 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 PKP2Q99959 881 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 DDX50Q9BQ39 737 aaKnown RBP11.48□□□□□ -0.57
RFC4-214ENST00000494047 DERL2Q9GZP9 239 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 GSTO2Q9H4Y5 243 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 CCM2LQ9NUG4 571 aaPredicted RBP11.48□□□□□ -0.57
RFC4-214ENST00000494047 TRMT13Q9NUP7 481 aaKnown RBP11.48□□□□□ -0.57
RFC4-214ENST00000494047 TAS2R13Q9NYV9 303 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 UBP1Q9NZI7 540 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 HS3ST4Q9Y661 456 aa11.48□□□□□ -0.57
RFC4-214ENST00000494047 NYNRINQ9P2P1 1898 aaKnown RBP11.48□□□□□ -0.57
RFC4-214ENST00000494047 TRIP12Q14669 1992 aaPredicted RBP11.48□□□□□ -0.57
RFC4-214ENST00000494047 E2F8A0AVK6 867 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms