RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 CCL27Q9Y4X3 112 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 STON1Q9Y6Q2 735 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 TTBK1Q5TCY1 1321 aaPredicted RBP6.25□□□□□ -1.41
SMC2-205ENST00000493955 LOC102723996A0A087X1L8 192 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 SMIM35A0A1B0GVV1 85 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 A6NL46 340 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 ATP2A1O14983 1001 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 MDM4O15151 490 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 QDPRP09417 244 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 CHRNB2P17787 502 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 ARHGAP25P42331 645 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 PRCPP42785 496 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 SNTB1Q13884 538 aaKnown RBP6.25□□□□□ -1.41
SMC2-205ENST00000493955 IGSF11Q5DX21 431 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 STRIP1Q5VSL9 837 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 FAM47EQ6ZV65 393 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 GALNTL5Q7Z4T8 443 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 PATL1Q86TB9 770 aaKnown RBP6.25□□□□□ -1.41
SMC2-205ENST00000493955 ANKRD13BQ86YJ7 626 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 CNGA4Q8IV77 575 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 ARID3BQ8IVW6 561 aaPredicted RBP6.25□□□□□ -1.41
SMC2-205ENST00000493955 ZBTB8BQ8NAP8 495 aaPredicted RBP6.25□□□□□ -1.41
SMC2-205ENST00000493955 MCUQ8NE86 351 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 OR8K5Q8NH50 307 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 TMEM163Q8TC26 289 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 TRPC4APQ8TEL6 797 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 CEP295NLQ96MC4 621 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 ADPGKQ9BRR6 497 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 SEMA4CQ9C0C4 833 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 MKKSQ9NPJ1 570 aaPredicted RBP6.25□□□□□ -1.41
SMC2-205ENST00000493955 DECR2Q9NUI1 292 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 PAG1Q9NWQ8 432 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 ZNHIT2Q9UHR6 403 aa6.25□□□□□ -1.41
SMC2-205ENST00000493955 A0A1B0GVM2 712 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 A0A1W2PPC1 479 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 LNP1A1A4G5 178 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 GAGE12JA6NER3 117 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 TLR2O60603 784 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 CNOT3O75175 753 aaKnown RBP6.24□□□□□ -1.41
SMC2-205ENST00000493955 PSMD10O75832 226 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 FTCDO95954 541 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 KLKB1P03952 638 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 TPOP07202 933 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 CPT2P23786 658 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 MPGP29372 298 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 SUOXP51687 545 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 GPR143P51810 404 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 ZNF41P51814 821 aaPredicted RBP6.24□□□□□ -1.41
SMC2-205ENST00000493955 CXCL9Q07325 125 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 DAZAP2Q15038 168 aaPredicted RBP6.24□□□□□ -1.41
SMC2-205ENST00000493955 INPP5JQ15735 1006 aaPredicted RBP6.24□□□□□ -1.41
SMC2-205ENST00000493955 ZNF628Q5EBL2 1059 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 LRCH2Q5VUJ6 765 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 TMEM198Q66K66 360 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 IL27RAQ6UWB1 636 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 MTSS1LQ765P7 747 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 MMP21Q8N119 569 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 AGBL3Q8NEM8 1001 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 PTPMT1Q8WUK0 201 aaPredicted RBP6.24□□□□□ -1.41
SMC2-205ENST00000493955 DPF1Q92782 380 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 ERGIC1Q969X5 290 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 RMDN1Q96DB5 314 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 MSI2Q96DH6 328 aaKnown RBP6.24□□□□□ -1.41
SMC2-205ENST00000493955 ZFYVE19Q96K21 471 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 CCDC106Q9BWC9 280 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 HINT3Q9NQE9 182 aaKnown RBP6.24□□□□□ -1.41
SMC2-205ENST00000493955 WDR35Q9P2L0 1181 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 COPG2Q9UBF2 871 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 CLIC4Q9Y696 253 aa6.24□□□□□ -1.41
SMC2-205ENST00000493955 TRBC2A0A5B9 178 aa6.23□□□□□ -1.41
SMC2-205ENST00000493955 WIPF3A6NGB9 483 aa6.23□□□□□ -1.41
SMC2-205ENST00000493955 SCG2P13521 617 aa6.23□□□□□ -1.41
SMC2-205ENST00000493955 GPTP24298 496 aa6.23□□□□□ -1.41
SMC2-205ENST00000493955 HOXC9P31274 260 aa6.23□□□□□ -1.41
SMC2-205ENST00000493955 KRT83P78385 493 aa6.23□□□□□ -1.41
SMC2-205ENST00000493955 ECT2LQ008S8 904 aa6.23□□□□□ -1.41
SMC2-205ENST00000493955 NHLH1Q02575 133 aa6.23□□□□□ -1.41
SMC2-205ENST00000493955 SCARB2Q14108 478 aa6.23□□□□□ -1.41
SMC2-205ENST00000493955 PNLIPRP3Q17RR3 467 aa6.23□□□□□ -1.41
SMC2-205ENST00000493955 MMEL1Q495T6 779 aa6.23□□□□□ -1.41
SMC2-205ENST00000493955 ANKRD54Q6NXT1 300 aa6.23□□□□□ -1.41
SMC2-205ENST00000493955 OR6J1Q8NGC5 347 aa6.23□□□□□ -1.41
SMC2-205ENST00000493955 GPT2Q8TD30 523 aa6.23□□□□□ -1.41
SMC2-205ENST00000493955 GFM1Q96RP9 751 aaKnown RBP6.23□□□□□ -1.41
SMC2-205ENST00000493955 NUDCD1Q96RS6 583 aa6.23□□□□□ -1.41
SMC2-205ENST00000493955 R3HDMLQ9H3Y0 253 aa6.23□□□□□ -1.41
SMC2-205ENST00000493955 ESRP2Q9H6T0 727 aaKnown RBP6.23□□□□□ -1.41
SMC2-205ENST00000493955 ZWILCHQ9H900 591 aa6.23□□□□□ -1.41
SMC2-205ENST00000493955 MTMR10Q9NXD2 777 aa6.23□□□□□ -1.41
SMC2-205ENST00000493955 FLRT1Q9NZU1 646 aa6.23□□□□□ -1.41
SMC2-205ENST00000493955 ZNF112Q9UJU3 913 aa6.23□□□□□ -1.41
SMC2-205ENST00000493955 ING1Q9UK53 422 aaPredicted RBP6.23□□□□□ -1.41
SMC2-205ENST00000493955 GPR75-ASB3A0A0A6YYF3 556 aa6.22□□□□□ -1.41
SMC2-205ENST00000493955 TCRBV21S2A2A0A5A6 115 aa6.22□□□□□ -1.41
SMC2-205ENST00000493955 ZNF814B7Z6K7 855 aa6.22□□□□□ -1.41
SMC2-205ENST00000493955 ATG13O75143 517 aa6.22□□□□□ -1.41
SMC2-205ENST00000493955 IFNA2P01563 188 aa6.22□□□□□ -1.41
SMC2-205ENST00000493955 HOXD9P28356 352 aaPredicted RBP6.22□□□□□ -1.41
SMC2-205ENST00000493955 CTNNA1P35221 906 aaKnown RBP6.22□□□□□ -1.41
SMC2-205ENST00000493955 ACVRL1P37023 503 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms