RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 TPSD1Q9BZJ3 242 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 NFKBIL1Q9UBC1 381 aaPredicted RBP12.43□□□□□ -0.42
SNX17-208ENST00000493711 SERGEFQ9UGK8 458 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 NFU1Q9UMS0 254 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 CYP8B1Q9UNU6 501 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 SPO11Q9Y5K1 396 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 MAD1L1Q9Y6D9 718 aa12.43□□□□□ -0.42
SNX17-208ENST00000493711 IGHV1OR15-9A0A0B4J2B8 117 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 C3orf80F5H4A9 247 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 WNT9AO14904 365 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 SPINT1O43278 529 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 CTIFO43310 598 aaKnown RBP12.42□□□□□ -0.42
SNX17-208ENST00000493711 LZTS3O60299 673 aaPredicted RBP12.42□□□□□ -0.42
SNX17-208ENST00000493711 RNGTTO60942 597 aaKnown RBP12.42□□□□□ -0.42
SNX17-208ENST00000493711 ERLIN1O75477 346 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 TM7SF2O76062 418 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 CLDN7O95471 211 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 PIRTP0C851 137 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 TDGF1P13385 188 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 DCDC1P59894 354 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 CREB5Q02930 508 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 PTSQ03393 145 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 DHX9Q08211 1270 aaKnown RBP12.42□□□□□ -0.42
SNX17-208ENST00000493711 RALGDSQ12967 914 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 FRG1Q14331 258 aaKnown RBP12.42□□□□□ -0.42
SNX17-208ENST00000493711 ACOX1Q15067 660 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 CNGA3Q16281 694 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 TSTD2Q5T7W7 516 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 TMEM135Q86UB9 458 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 CCDC25Q86WR0 208 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 FOXJ1Q92949 421 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 TOE1Q96GM8 510 aaKnown RBP12.42□□□□□ -0.42
SNX17-208ENST00000493711 COQ10AQ96MF6 247 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 PLEKHG4BQ96PX9 1271 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 C1QTNF2Q9BXJ5 285 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 PARD6BQ9BYG5 372 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 SAYSD1Q9NPB0 183 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 NLE1Q9NVX2 485 aaPredicted RBP12.42□□□□□ -0.42
SNX17-208ENST00000493711 ZSCAN32Q9NX65 697 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 SYBUQ9NX95 663 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 IL17CQ9P0M4 197 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 ZC3H7BQ9UGR2 993 aaKnown RBP12.42□□□□□ -0.42
SNX17-208ENST00000493711 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.42□□□□□ -0.42
SNX17-208ENST00000493711 APPL1Q9UKG1 709 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 RAB21Q9UL25 225 aa12.42□□□□□ -0.42
SNX17-208ENST00000493711 V9GYY5 206 aaPredicted RBP12.42□□□□□ -0.42
SNX17-208ENST00000493711 LDB2O43679 373 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 MMP20O60882 483 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 USP1O94782 785 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 PRKCGP05129 697 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 C6P13671 934 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 LHCGRP22888 699 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 ECHS1P30084 290 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 ACSL1P33121 698 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 ELK3P41970 407 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 MAGEA4P43358 317 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 SPINT3P49223 89 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 ZNF140P52738 457 aaPredicted RBP12.41□□□□□ -0.42
SNX17-208ENST00000493711 ACVR1Q04771 509 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 KCTD19Q17RG1 926 aaPredicted RBP12.41□□□□□ -0.42
SNX17-208ENST00000493711 TMEM259Q4ZIN3 620 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 SETMARQ53H47 684 aaPredicted RBP12.41□□□□□ -0.42
SNX17-208ENST00000493711 LRRC73Q5JTD7 316 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 SPANXN3Q5MJ09 141 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 KIAA0895LQ68EN5 471 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 PDPK2PQ6A1A2 396 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 ZNF449Q6P9G9 518 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 EMBQ6PCB8 327 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 TRMT10CQ7L0Y3 403 aaKnown RBP12.41□□□□□ -0.42
SNX17-208ENST00000493711 TSPAN33Q86UF1 283 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 PALM2Q8IXS6 379 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 LMNTD2Q8IXW0 634 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 ZBED8Q8IZ13 594 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 PRSS33Q8NF86 280 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 FAM174AQ8TBP5 190 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 NELL1Q92832 810 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 SGSM3Q96HU1 749 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 WRAP53Q9BUR4 548 aaKnown RBP12.41□□□□□ -0.42
SNX17-208ENST00000493711 FAM83DQ9H4H8 585 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 PIH1D1Q9NWS0 290 aaKnown RBP12.41□□□□□ -0.42
SNX17-208ENST00000493711 DMTF1Q9Y222 760 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 ITM2BQ9Y287 266 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 ARL5AQ9Y689 179 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 TEX264Q9Y6I9 313 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 CACNA1AO00555 2505 aa12.41□□□□□ -0.42
SNX17-208ENST00000493711 A0A1W2PQU0 124 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 IGLON5A6NGN9 336 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 A8MX80 341 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 H7C0S8 307 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 TOR1BO14657 336 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 LATO43561 262 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 RPP40O75818 363 aaKnown RBP12.4□□□□□ -0.42
SNX17-208ENST00000493711 RECQL5O94762 991 aaPredicted RBP12.4□□□□□ -0.42
SNX17-208ENST00000493711 TEAD1P28347 426 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 PHBP35232 272 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 PPARGP37231 505 aaPredicted RBP12.4□□□□□ -0.42
SNX17-208ENST00000493711 SPAM1P38567 509 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 PXNP49023 591 aaPredicted RBP12.4□□□□□ -0.42
SNX17-208ENST00000493711 FNTBP49356 437 aa12.4□□□□□ -0.42
SNX17-208ENST00000493711 VSNL1P62760 191 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms