RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 ARL14Q8N4G2 192 aa17.24■□□□□ 0.35
SGMS1-204ENST00000492601 PTCD2Q8WV60 388 aaKnown RBP17.24■□□□□ 0.35
SGMS1-204ENST00000492601 CTNNBL1Q8WYA6 563 aaPredicted RBP17.24■□□□□ 0.35
SGMS1-204ENST00000492601 TEX101Q9BY14 249 aa17.24■□□□□ 0.35
SGMS1-204ENST00000492601 POLR1EQ9GZS1 481 aaKnown RBP17.24■□□□□ 0.35
SGMS1-204ENST00000492601 ATXN7L1Q9ULK2 861 aaPredicted RBP17.24■□□□□ 0.35
SGMS1-204ENST00000492601 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.24■□□□□ 0.35
SGMS1-204ENST00000492601 RNF215Q9Y6U7 377 aa17.24■□□□□ 0.35
SGMS1-204ENST00000492601 HELZ2Q9BYK8 2649 aaKnown RBP17.23■□□□□ 0.35
SGMS1-204ENST00000492601 PSMD11O00231 422 aa17.23■□□□□ 0.35
SGMS1-204ENST00000492601 FUCA1P04066 466 aa17.23■□□□□ 0.35
SGMS1-204ENST00000492601 TPM3P06753 285 aa17.23■□□□□ 0.35
SGMS1-204ENST00000492601 H2AFZP0C0S5 128 aa17.23■□□□□ 0.35
SGMS1-204ENST00000492601 GLB1P16278 677 aa17.23■□□□□ 0.35
SGMS1-204ENST00000492601 HNRNPH3P31942 346 aaKnown RBP17.23■□□□□ 0.35
SGMS1-204ENST00000492601 POLD2P49005 469 aa17.23■□□□□ 0.35
SGMS1-204ENST00000492601 CDK3Q00526 305 aa17.23■□□□□ 0.35
SGMS1-204ENST00000492601 IHHQ14623 411 aa17.23■□□□□ 0.35
SGMS1-204ENST00000492601 TSR1Q2NL82 804 aaKnown RBP17.23■□□□□ 0.35
SGMS1-204ENST00000492601 C14orf28Q4W4Y0 310 aa17.23■□□□□ 0.35
SGMS1-204ENST00000492601 ZFYVE27Q5T4F4 411 aa17.23■□□□□ 0.35
SGMS1-204ENST00000492601 ARHGAP40Q5TG30 622 aa17.23■□□□□ 0.35
SGMS1-204ENST00000492601 LRRC66Q68CR7 880 aa17.23■□□□□ 0.35
SGMS1-204ENST00000492601 DOK6Q6PKX4 331 aa17.23■□□□□ 0.35
SGMS1-204ENST00000492601 H2AFVQ71UI9 128 aa17.23■□□□□ 0.35
SGMS1-204ENST00000492601 LIN37Q96GY3 246 aaPredicted RBP17.23■□□□□ 0.35
SGMS1-204ENST00000492601 FRMD8Q9BZ67 464 aaPredicted RBP17.23■□□□□ 0.35
SGMS1-204ENST00000492601 SPATS2LQ9NUQ6 558 aaKnown RBP17.23■□□□□ 0.35
SGMS1-204ENST00000492601 RBM22Q9NW64 420 aaKnown RBP eCLIP17.23■□□□□ 0.35
SGMS1-204ENST00000492601 KCTD5Q9NXV2 234 aa17.23■□□□□ 0.35
SGMS1-204ENST00000492601 LRIT1Q9P2V4 623 aa17.23■□□□□ 0.35
SGMS1-204ENST00000492601 UVRAGQ9P2Y5 699 aa17.23■□□□□ 0.35
SGMS1-204ENST00000492601 PIEZO2Q9H5I5 2752 aa17.23■□□□□ 0.35
SGMS1-204ENST00000492601 CFAP46Q8IYW2 2715 aa17.23■□□□□ 0.35
SGMS1-204ENST00000492601 CDRT15L2A8MXV6 281 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 MATN3O15232 486 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 ATXN7O15265 892 aaPredicted RBP17.22■□□□□ 0.35
SGMS1-204ENST00000492601 CCNB1P14635 433 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 EPHB1P54762 984 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 INHBCP55103 352 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 TMPRSS3P57727 454 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 GBE1Q04446 702 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 HLTFQ14527 1009 aaKnown RBP eCLIP17.22■□□□□ 0.35
SGMS1-204ENST00000492601 PDK2Q15119 407 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 SLC18A3Q16572 532 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 IFI16Q16666 785 aaKnown RBP17.22■□□□□ 0.35
SGMS1-204ENST00000492601 TIGD7Q6NT04 549 aaPredicted RBP17.22■□□□□ 0.35
SGMS1-204ENST00000492601 RAB11FIP2Q7L804 512 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 TECPR1Q7Z6L1 1165 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 NRROSQ86YC3 692 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 NDUFAF2Q8N183 169 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 FBXO39Q8N4B4 442 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 PQLC3Q8N755 202 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 GPBAR1Q8TDU6 330 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 SLC39A7Q92504 469 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 MAML1Q92585 1016 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 ZNF670Q9BS34 389 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 DPH1Q9BZG8 443 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 STRADBQ9C0K7 418 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 DEF6Q9H4E7 631 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 WDR70Q9NW82 654 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 APPL1Q9UKG1 709 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 SUFUQ9UMX1 484 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 CHKBQ9Y259 395 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 PPIL1Q9Y3C6 166 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 COL6A6A6NMZ7 2263 aa17.22■□□□□ 0.35
SGMS1-204ENST00000492601 A0A0J9YYE9 177 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 TEX51A0A1B0GUA7 166 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 PLD2O14939 933 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 FZD6O60353 706 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 TRBC1P01850 177 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 KRT7P08729 469 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 KRT10P13645 584 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 HGFP14210 728 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 CCNCP24863 283 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 AK4P27144 223 aaPredicted RBP17.21■□□□□ 0.35
SGMS1-204ENST00000492601 UGT1A5P35504 534 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 GPR1P46091 355 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 UCNP55089 124 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 MAZP56270 477 aaKnown RBP17.21■□□□□ 0.35
SGMS1-204ENST00000492601 ILF3Q12906 894 aaKnown RBP eCLIP17.21■□□□□ 0.35
SGMS1-204ENST00000492601 SLC10A2Q12908 348 aaPredicted RBP17.21■□□□□ 0.35
SGMS1-204ENST00000492601 SLC30A9Q6PML9 568 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 SPRED1Q7Z699 444 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 MAP7D3Q8IWC1 876 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 OR8K1Q8NGG5 319 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 KIAA1524Q8TCG1 905 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 ZDHHC1Q8WTX9 485 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 SCAMP4Q969E2 229 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 FAF2Q96CS3 445 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 AP2M1Q96CW1 435 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 GSDMCQ9BYG8 508 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 ABCG8Q9H221 673 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 TAAR2Q9P1P5 351 aa17.21■□□□□ 0.35
SGMS1-204ENST00000492601 TMX2-CTNND1H3BSU7 103 aa17.2■□□□□ 0.34
SGMS1-204ENST00000492601 AKR1B10O60218 316 aa17.2■□□□□ 0.34
SGMS1-204ENST00000492601 FGF1P05230 155 aa17.2■□□□□ 0.34
SGMS1-204ENST00000492601 HLA-DQB2P05538 268 aa17.2■□□□□ 0.34
SGMS1-204ENST00000492601 ITGA2BP08514 1039 aa17.2■□□□□ 0.34
SGMS1-204ENST00000492601 SKOR1P84550 965 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms