RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 GSDMCQ9BYG8 508 aa19.9■□□□□ 0.78
NELFE-212ENST00000492539 TRIM5Q9C035 493 aa19.9■□□□□ 0.78
NELFE-212ENST00000492539 CARS2Q9HA77 564 aaKnown RBP19.9■□□□□ 0.78
NELFE-212ENST00000492539 PHPT1Q9NRX4 125 aaPredicted RBP19.9■□□□□ 0.78
NELFE-212ENST00000492539 KCTD5Q9NXV2 234 aa19.9■□□□□ 0.78
NELFE-212ENST00000492539 CWC15Q9P013 229 aaKnown RBP19.9■□□□□ 0.78
NELFE-212ENST00000492539 LUC7L2Q9Y383 392 aaKnown RBP19.9■□□□□ 0.78
NELFE-212ENST00000492539 TLN1Q9Y490 2541 aaKnown RBP19.9■□□□□ 0.78
NELFE-212ENST00000492539 TTC24A2A3L6 582 aaPredicted RBP19.89■□□□□ 0.77
NELFE-212ENST00000492539 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.89■□□□□ 0.77
NELFE-212ENST00000492539 AGRPO00253 132 aa19.89■□□□□ 0.77
NELFE-212ENST00000492539 PRPSAP2O60256 369 aa19.89■□□□□ 0.77
NELFE-212ENST00000492539 LRCH4O75427 683 aa19.89■□□□□ 0.77
NELFE-212ENST00000492539 HEXIM1O94992 359 aaKnown RBP19.89■□□□□ 0.77
NELFE-212ENST00000492539 WISP1O95388 367 aa19.89■□□□□ 0.77
NELFE-212ENST00000492539 PEX11BO96011 259 aa19.89■□□□□ 0.77
NELFE-212ENST00000492539 FGF1P05230 155 aa19.89■□□□□ 0.77
NELFE-212ENST00000492539 CASP14P31944 242 aa19.89■□□□□ 0.77
NELFE-212ENST00000492539 VIPR1P32241 457 aa19.89■□□□□ 0.77
NELFE-212ENST00000492539 NFATC3Q12968 1075 aa19.89■□□□□ 0.77
NELFE-212ENST00000492539 CLPPQ16740 277 aaPredicted RBP19.89■□□□□ 0.77
NELFE-212ENST00000492539 PHF19Q5T6S3 580 aa19.89■□□□□ 0.77
NELFE-212ENST00000492539 PIM3Q86V86 326 aa19.89■□□□□ 0.77
NELFE-212ENST00000492539 HEATR4Q86WZ0 1026 aa19.89■□□□□ 0.77
NELFE-212ENST00000492539 ZDHHC1Q8WTX9 485 aa19.89■□□□□ 0.77
NELFE-212ENST00000492539 EXTL1Q92935 676 aa19.89■□□□□ 0.77
NELFE-212ENST00000492539 DTD2Q96FN9 168 aa19.89■□□□□ 0.77
NELFE-212ENST00000492539 FRMD8Q9BZ67 464 aaPredicted RBP19.89■□□□□ 0.77
NELFE-212ENST00000492539 TRIM7Q9C029 511 aa19.89■□□□□ 0.77
NELFE-212ENST00000492539 HAUS4Q9H6D7 363 aa19.89■□□□□ 0.77
NELFE-212ENST00000492539 RDH14Q9HBH5 336 aa19.89■□□□□ 0.77
NELFE-212ENST00000492539 TRNAU1APQ9NX07 287 aaKnown RBP19.89■□□□□ 0.77
NELFE-212ENST00000492539 PCDHGC4Q9Y5F7 938 aa19.89■□□□□ 0.77
NELFE-212ENST00000492539 PCDHGA4Q9Y5G9 962 aa19.89■□□□□ 0.77
NELFE-212ENST00000492539 CPP00450 1065 aa19.88■□□□□ 0.77
NELFE-212ENST00000492539 ITGB6P18564 788 aa19.88■□□□□ 0.77
NELFE-212ENST00000492539 WT1P19544 449 aaPredicted RBP19.88■□□□□ 0.77
NELFE-212ENST00000492539 LHCGRP22888 699 aa19.88■□□□□ 0.77
NELFE-212ENST00000492539 TEAD1P28347 426 aa19.88■□□□□ 0.77
NELFE-212ENST00000492539 HSPA9P38646 679 aaKnown RBP19.88■□□□□ 0.77
NELFE-212ENST00000492539 OR1D5P58170 312 aa19.88■□□□□ 0.77
NELFE-212ENST00000492539 KCNC4Q03721 635 aa19.88■□□□□ 0.77
NELFE-212ENST00000492539 KLHL30Q0D2K2 578 aa19.88■□□□□ 0.77
NELFE-212ENST00000492539 ILF3Q12906 894 aaKnown RBP eCLIP19.88■□□□□ 0.77
NELFE-212ENST00000492539 ZNF574Q6ZN55 896 aaPredicted RBP19.88■□□□□ 0.77
NELFE-212ENST00000492539 VASH2Q86V25 355 aa19.88■□□□□ 0.77
NELFE-212ENST00000492539 PGBD5Q8N414 524 aa19.88■□□□□ 0.77
NELFE-212ENST00000492539 PTCD2Q8WV60 388 aaKnown RBP19.88■□□□□ 0.77
NELFE-212ENST00000492539 NUDCD1Q96RS6 583 aa19.88■□□□□ 0.77
NELFE-212ENST00000492539 STARD5Q9NSY2 213 aa19.88■□□□□ 0.77
NELFE-212ENST00000492539 TAAR2Q9P1P5 351 aa19.88■□□□□ 0.77
NELFE-212ENST00000492539 PSMD11O00231 422 aa19.87■□□□□ 0.77
NELFE-212ENST00000492539 HGSO14964 777 aaPredicted RBP19.87■□□□□ 0.77
NELFE-212ENST00000492539 GZMAP12544 262 aa19.87■□□□□ 0.77
NELFE-212ENST00000492539 AK4P27144 223 aaPredicted RBP19.87■□□□□ 0.77
NELFE-212ENST00000492539 CDK3Q00526 305 aa19.87■□□□□ 0.77
NELFE-212ENST00000492539 ZNF235Q14590 738 aa19.87■□□□□ 0.77
NELFE-212ENST00000492539 DPYSL2Q16555 572 aa19.87■□□□□ 0.77
NELFE-212ENST00000492539 PRICKLE2Q7Z3G6 844 aa19.87■□□□□ 0.77
NELFE-212ENST00000492539 ZNF571Q7Z3V5 609 aaPredicted RBP19.87■□□□□ 0.77
NELFE-212ENST00000492539 MGME1Q9BQP7 344 aa19.87■□□□□ 0.77
NELFE-212ENST00000492539 NUDT22Q9BRQ3 303 aa19.87■□□□□ 0.77
NELFE-212ENST00000492539 ARHGAP9Q9BRR9 750 aa19.87■□□□□ 0.77
NELFE-212ENST00000492539 FAM117AQ9C073 453 aa19.87■□□□□ 0.77
NELFE-212ENST00000492539 ZWILCHQ9H900 591 aa19.87■□□□□ 0.77
NELFE-212ENST00000492539 PHTF1Q9UMS5 762 aa19.87■□□□□ 0.77
NELFE-212ENST00000492539 SUFUQ9UMX1 484 aa19.87■□□□□ 0.77
NELFE-212ENST00000492539 PCDHB11Q9Y5F2 797 aa19.87■□□□□ 0.77
NELFE-212ENST00000492539 ST14Q9Y5Y6 855 aa19.87■□□□□ 0.77
NELFE-212ENST00000492539 BZW2Q9Y6E2 419 aaKnown RBP19.87■□□□□ 0.77
NELFE-212ENST00000492539 SPTA1P02549 2419 aa19.86■□□□□ 0.77
NELFE-212ENST00000492539 RHPN2P1A8MT19 583 aa19.86■□□□□ 0.77
NELFE-212ENST00000492539 ECEL1O95672 775 aa19.86■□□□□ 0.77
NELFE-212ENST00000492539 TPM1P09493 284 aa19.86■□□□□ 0.77
NELFE-212ENST00000492539 CYP2A6P11509 494 aaPredicted RBP19.86■□□□□ 0.77
NELFE-212ENST00000492539 SKILP12757 684 aa19.86■□□□□ 0.77
NELFE-212ENST00000492539 CCL4P13236 92 aa19.86■□□□□ 0.77
NELFE-212ENST00000492539 NFKBIAP25963 317 aa19.86■□□□□ 0.77
NELFE-212ENST00000492539 HNRNPH3P31942 346 aaKnown RBP19.86■□□□□ 0.77
NELFE-212ENST00000492539 PCK1P35558 622 aa19.86■□□□□ 0.77
NELFE-212ENST00000492539 ETV3P41162 512 aa19.86■□□□□ 0.77
NELFE-212ENST00000492539 GNPDA1P46926 289 aa19.86■□□□□ 0.77
NELFE-212ENST00000492539 TRAF2Q12933 501 aa19.86■□□□□ 0.77
NELFE-212ENST00000492539 AMZ1Q400G9 498 aa19.86■□□□□ 0.77
NELFE-212ENST00000492539 HGSNATQ68CP4 663 aa19.86■□□□□ 0.77
NELFE-212ENST00000492539 HSD11B1LQ7Z5J1 315 aa19.86■□□□□ 0.77
NELFE-212ENST00000492539 NAGSQ8N159 534 aa19.86■□□□□ 0.77
NELFE-212ENST00000492539 PDCD6IPQ8WUM4 868 aaKnown RBP19.86■□□□□ 0.77
NELFE-212ENST00000492539 MRFAP1L1Q96HT8 127 aa19.86■□□□□ 0.77
NELFE-212ENST00000492539 MCCC1Q96RQ3 725 aaPredicted RBP19.86■□□□□ 0.77
NELFE-212ENST00000492539 SEMA3CQ99985 751 aa19.86■□□□□ 0.77
NELFE-212ENST00000492539 SUDS3Q9H7L9 328 aaPredicted RBP19.86■□□□□ 0.77
NELFE-212ENST00000492539 NOD2Q9HC29 1040 aa19.86■□□□□ 0.77
NELFE-212ENST00000492539 ETNK2Q9NVF9 386 aa19.86■□□□□ 0.77
NELFE-212ENST00000492539 AKAP7Q9P0M2 348 aaPredicted RBP19.86■□□□□ 0.77
NELFE-212ENST00000492539 CNOT8Q9UFF9 292 aaKnown RBP19.86■□□□□ 0.77
NELFE-212ENST00000492539 SLC17A4Q9Y2C5 497 aa19.86■□□□□ 0.77
NELFE-212ENST00000492539 HEMK1Q9Y5R4 338 aaPredicted RBP19.86■□□□□ 0.77
NELFE-212ENST00000492539 UBR5O95071 2799 aaPredicted RBP19.86■□□□□ 0.77
NELFE-212ENST00000492539 IGHV5-10-1A0A0J9YXX1 117 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms