RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 PRAMEF33A0A0G2JMD5 474 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 KCNK1O00180 336 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 CACNB4O00305 520 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-211ENST00000491581 ATXN7O15265 892 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-211ENST00000491581 PPM1DO15297 605 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 FZD6O60353 706 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 PRAMEF10O60809 474 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 DXOO77932 396 aaKnown RBP8.89□□□□□ -0.99
HDAC3-211ENST00000491581 CLDN7O95471 211 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 ECEL1O95672 775 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 MMP2P08253 660 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 CCL4P13236 92 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 TNNT1P13805 278 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 HTR1BP28222 390 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 ALDH4A1P30038 563 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 SLC5A2P31639 672 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 HTR7P34969 479 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 TRIM23P36406 574 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 NOP2P46087 812 aaKnown RBP8.89□□□□□ -0.99
HDAC3-211ENST00000491581 MAPK10P53779 464 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 AP1S1P61966 158 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 SKOR1P84550 965 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 CDK3Q00526 305 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 NFKB2Q00653 900 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 B4GALNT1Q00973 533 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 PTSQ03393 145 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 CFHR1Q03591 330 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 ZBTB17Q13105 803 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 GALNT3Q14435 633 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 HLTFQ14527 1009 aaKnown RBP eCLIP8.89□□□□□ -0.99
HDAC3-211ENST00000491581 NOMO1Q15155 1222 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 C14orf28Q4W4Y0 310 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 ANKRD20A8PQ5CZ79 823 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 FIGNQ5HY92 759 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 CERCAMQ5T4B2 595 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 MARC1Q5VT66 337 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 RAET1GQ6H3X3 334 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 RAB11FIP2Q7L804 512 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 SPRED1Q7Z699 444 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 TECPR1Q7Z6L1 1165 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 GKN2Q86XP6 184 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 FSTL5Q8N475 847 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-211ENST00000491581 NIPA2Q8N8Q9 360 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 ARRDC2Q8TBH0 407 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 ZNF564Q8TBZ8 553 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-211ENST00000491581 HCAR2Q8TDS4 363 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 EID2BQ96D98 161 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 UBL7Q96S82 380 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-211ENST00000491581 TEX101Q9BY14 249 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 FRMD8Q9BZ67 464 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-211ENST00000491581 MRPL47Q9HD33 250 aaKnown RBP8.89□□□□□ -0.99
HDAC3-211ENST00000491581 TAAR2Q9P1P5 351 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 DGKBQ9Y6T7 804 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 SDK2Q58EX2 2172 aa8.89□□□□□ -0.99
HDAC3-211ENST00000491581 KNTC1P50748 2209 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 ZNF106Q9H2Y7 1883 aaKnown RBP8.88□□□□□ -0.99
HDAC3-211ENST00000491581 CCDC187A0A096LP49 1063 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 A0A1W2PQJ5 194 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 FADS2P1A8MWK0 482 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 C9orf172C9J069 976 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 PLD2O14939 933 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 SLC4A1P02730 911 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 MYBL1P10243 752 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 MYCLP1P12525 358 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-211ENST00000491581 CCNB1P14635 433 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 RBMS1P29558 406 aaKnown RBP8.88□□□□□ -0.99
HDAC3-211ENST00000491581 CSF2RBP32927 897 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 CA5AP35218 305 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 ADCY8P40145 1251 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 GARSP41250 739 aaKnown RBP8.88□□□□□ -0.99
HDAC3-211ENST00000491581 RPIAP49247 311 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 INHBCP55103 352 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 ZBED6P86452 979 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 CTBSQ01459 385 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 GALNT2Q10471 571 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 PIGHQ14442 188 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-211ENST00000491581 MESDQ14696 234 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 RFTN1Q14699 578 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-211ENST00000491581 GRM3Q14832 879 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 ASTE1Q2TB18 679 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-211ENST00000491581 BOLA3Q53S33 107 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 PHF19Q5T6S3 580 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 ARMC12Q5T9G4 340 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 OGFOD3Q6PK18 319 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 ZSCAN30Q86W11 494 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 PSTKQ8IV42 348 aaKnown RBP8.88□□□□□ -0.99
HDAC3-211ENST00000491581 NAGSQ8N159 534 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 FBXO39Q8N4B4 442 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 ARL14Q8N4G2 192 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 TEX26Q8N6G2 289 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 CNTD1Q8N815 330 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 RNF214Q8ND24 703 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 LPCAT1Q8NF37 534 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 WDR36Q8NI36 951 aaKnown RBP8.88□□□□□ -0.99
HDAC3-211ENST00000491581 FAM71BQ8TC56 605 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 GPBAR1Q8TDU6 330 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 ZDHHC1Q8WTX9 485 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 NAT14Q8WUY8 206 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 TEKT4Q8WW24 435 aa8.88□□□□□ -0.99
HDAC3-211ENST00000491581 TTC9Q92623 222 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms