RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 LRRD1A4D1F6 860 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 RRP8O43159 456 aaKnown RBP17.97■□□□□ 0.47
HMGN1-219ENST00000491183 NOBOXO60393 691 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 MX2P20592 715 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 ARHGAP25P42331 645 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 CCL7P80098 99 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 CDK3Q00526 305 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 DPTQ07507 201 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 C3orf38Q5JPI3 329 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 LRRC66Q68CR7 880 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 LRRC69Q6ZNQ3 347 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 NRROSQ86YC3 692 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 CCDC13Q8IYE1 715 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 LSMEM2Q8N112 164 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 CNTD1Q8N815 330 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 CCNYQ8ND76 341 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 WDR48Q8TAF3 677 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 GRAMD1AQ96CP6 724 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 HIC2Q96JB3 615 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 ZNF578Q96N58 590 aaPredicted RBP17.97■□□□□ 0.47
HMGN1-219ENST00000491183 LGMNQ99538 433 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 TDRD1Q9BXT4 1180 aaKnown RBP17.97■□□□□ 0.47
HMGN1-219ENST00000491183 ASCL3Q9NQ33 180 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 CD84Q9UIB8 345 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 TTLL3Q9Y4R7 772 aa17.97■□□□□ 0.47
HMGN1-219ENST00000491183 A0A1W2PQM1 296 aa17.96■□□□□ 0.47
HMGN1-219ENST00000491183 PMS2P1A4D2B8 440 aa17.96■□□□□ 0.47
HMGN1-219ENST00000491183 ZNF487B1APH4 448 aa17.96■□□□□ 0.47
HMGN1-219ENST00000491183 KCNK1O00180 336 aa17.96■□□□□ 0.47
HMGN1-219ENST00000491183 SOD1P00441 154 aa17.96■□□□□ 0.47
HMGN1-219ENST00000491183 JCHAINP01591 159 aa17.96■□□□□ 0.47
HMGN1-219ENST00000491183 MMP2P08253 660 aa17.96■□□□□ 0.47
HMGN1-219ENST00000491183 TEAD1P28347 426 aa17.96■□□□□ 0.47
HMGN1-219ENST00000491183 POLD2P49005 469 aa17.96■□□□□ 0.47
HMGN1-219ENST00000491183 PPIDQ08752 370 aaKnown RBP17.96■□□□□ 0.47
HMGN1-219ENST00000491183 CCDC173Q0VFZ6 552 aa17.96■□□□□ 0.47
HMGN1-219ENST00000491183 SPIDRQ14159 915 aa17.96■□□□□ 0.47
HMGN1-219ENST00000491183 TCEAL1Q15170 157 aa17.96■□□□□ 0.47
HMGN1-219ENST00000491183 SOWAHCQ53LP3 525 aaPredicted RBP17.96■□□□□ 0.47
HMGN1-219ENST00000491183 SLC9A4Q6AI14 798 aa17.96■□□□□ 0.47
HMGN1-219ENST00000491183 RAET1GQ6H3X3 334 aa17.96■□□□□ 0.47
HMGN1-219ENST00000491183 RHOT2Q8IXI1 618 aa17.96■□□□□ 0.47
HMGN1-219ENST00000491183 NDUFAF2Q8N183 169 aa17.96■□□□□ 0.47
HMGN1-219ENST00000491183 GPBAR1Q8TDU6 330 aa17.96■□□□□ 0.47
HMGN1-219ENST00000491183 SCAMP4Q969E2 229 aa17.96■□□□□ 0.47
HMGN1-219ENST00000491183 SUDS3Q9H7L9 328 aaPredicted RBP17.96■□□□□ 0.47
HMGN1-219ENST00000491183 CARS2Q9HA77 564 aaKnown RBP17.96■□□□□ 0.47
HMGN1-219ENST00000491183 SPATS2LQ9NUQ6 558 aaKnown RBP17.96■□□□□ 0.47
HMGN1-219ENST00000491183 HYOU1Q9Y4L1 999 aa17.96■□□□□ 0.47
HMGN1-219ENST00000491183 ST14Q9Y5Y6 855 aa17.96■□□□□ 0.47
HMGN1-219ENST00000491183 GOLGA6CA6NDK9 693 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 GOLGA6BA6NDN3 693 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 AKR1B15C9JRZ8 316 aaPredicted RBP17.95■□□□□ 0.46
HMGN1-219ENST00000491183 GOLGA6DP0CG33 693 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 STC1P52823 247 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 EPHB1P54762 984 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 ERVPABLB-1P60509 514 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 SKOR1P84550 965 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 ZBTB17Q13105 803 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 IGF2-ASQ6U949 168 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 NPNTQ6UXI9 565 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 NLRP8Q86W28 1048 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 VSIG1Q86XK7 387 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 OR6C4Q8NGE1 309 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 AP2M1Q96CW1 435 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 SLC46A1Q96NT5 459 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 AGAP2Q99490 1192 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 LRRN3Q9H3W5 708 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 DPEP2Q9H4A9 486 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 PRORYQ9H606 182 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 SYNDIG1Q9H7V2 258 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 PCDH9Q9HC56 1237 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 GOLGA6AQ9NYA3 693 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 INTUQ9ULD6 942 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 SUFUQ9UMX1 484 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 SLC17A4Q9Y2C5 497 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 HEY1Q9Y5J3 304 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 RNF215Q9Y6U7 377 aa17.95■□□□□ 0.46
HMGN1-219ENST00000491183 UNC13CQ8NB66 2214 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 CAPN8A6NHC0 703 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 B4DGG1 531 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 CLDN7O95471 211 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 FGF1P05230 155 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 RPLP0P05388 317 aaKnown RBP17.94■□□□□ 0.46
HMGN1-219ENST00000491183 KRT10P13645 584 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 GLB1P16278 677 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 ZNF30P17039 623 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 GPR1P46091 355 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 GNPDA1P46926 289 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 IFI35P80217 286 aaPredicted RBP17.94■□□□□ 0.46
HMGN1-219ENST00000491183 HLTFQ14527 1009 aaKnown RBP eCLIP17.94■□□□□ 0.46
HMGN1-219ENST00000491183 C14orf28Q4W4Y0 310 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 CERCAMQ5T4B2 595 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 LRRC38Q5VT99 294 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 ADAMTSL4Q6UY14 1074 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 B3GNT8Q7Z7M8 397 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 CNGA4Q8IV77 575 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 SPACA3Q8IXA5 215 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 LPCAT1Q8NF37 534 aa17.94■□□□□ 0.46
HMGN1-219ENST00000491183 RNF25Q96BH1 459 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms