RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 TBC1D3IA0A087WXS9 549 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 TBC1D3EA0A087X179 549 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 TBC1D3KA0A087X1G2 549 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 A0A0U1RQS6 177 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 TBC1D3FA6NER0 549 aaPredicted RBP18.6■□□□□ 0.57
MCF2L-230ENST00000491028 TBC1D3LB9A6J9 549 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 H7C0S8 307 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 BUD23O43709 281 aaKnown RBP18.6■□□□□ 0.57
MCF2L-230ENST00000491028 MMP20O60882 483 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 RNGTTO60942 597 aaKnown RBP18.6■□□□□ 0.57
MCF2L-230ENST00000491028 RPP40O75818 363 aaKnown RBP18.6■□□□□ 0.57
MCF2L-230ENST00000491028 TM7SF2O76062 418 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 TBC1D3HP0C7X1 549 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 NMBRP28336 390 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 SPINT3P49223 89 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 FRG1Q14331 258 aaKnown RBP18.6■□□□□ 0.57
MCF2L-230ENST00000491028 CRYMQ14894 314 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 ACOX1Q15067 660 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 AGERQ15109 404 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 TMEM259Q4ZIN3 620 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 TBC1D3GQ6DHY5 549 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 KIAA0930Q6ICG6 404 aaPredicted RBP18.6■□□□□ 0.57
MCF2L-230ENST00000491028 TBC1D3CQ6IPX1 549 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 UNC5AQ6ZN44 842 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 ZNF765Q7L2R6 523 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 HSD11B1LQ7Z5J1 315 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 TRIM69Q86WT6 500 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 HORMAD1Q86X24 394 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 PALM2Q8IXS6 379 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 TBC1D3Q8IZP1 549 aaPredicted RBP18.6■□□□□ 0.57
MCF2L-230ENST00000491028 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.6■□□□□ 0.57
MCF2L-230ENST00000491028 OR13J1Q8NGT2 312 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 ASB12Q8WXK4 309 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 MFSD3Q96ES6 412 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 CFAP36Q96G28 342 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 TOE1Q96GM8 510 aaKnown RBP18.6■□□□□ 0.57
MCF2L-230ENST00000491028 DNAJC1Q96KC8 554 aaKnown RBP18.6■□□□□ 0.57
MCF2L-230ENST00000491028 PLEKHG4BQ96PX9 1271 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 FAM126AQ9BYI3 521 aaPredicted RBP18.6■□□□□ 0.57
MCF2L-230ENST00000491028 PCED1AQ9H1Q7 454 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 NINJ2Q9NZG7 142 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 KCTD3Q9Y597 815 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 FAM169AQ9Y6X4 670 aa18.6■□□□□ 0.57
MCF2L-230ENST00000491028 UQCRHLA0A096LP55 91 aa18.59■□□□□ 0.57
MCF2L-230ENST00000491028 ZCWPW2A0A1B0GU75 182 aa18.59■□□□□ 0.57
MCF2L-230ENST00000491028 CCDC78A2IDD5 438 aa18.59■□□□□ 0.57
MCF2L-230ENST00000491028 PRR33A8MZF0 331 aa18.59■□□□□ 0.57
MCF2L-230ENST00000491028 C10orf142B7Z368 130 aa18.59■□□□□ 0.57
MCF2L-230ENST00000491028 WNT9AO14904 365 aa18.59■□□□□ 0.57
MCF2L-230ENST00000491028 LZTS3O60299 673 aaPredicted RBP18.59■□□□□ 0.57
MCF2L-230ENST00000491028 UQCRHP07919 91 aa18.59■□□□□ 0.57
MCF2L-230ENST00000491028 BPIP17213 487 aa18.59■□□□□ 0.57
MCF2L-230ENST00000491028 SPAM1P38567 509 aa18.59■□□□□ 0.57
MCF2L-230ENST00000491028 PMS2P54278 862 aa18.59■□□□□ 0.57
MCF2L-230ENST00000491028 CSTF1Q05048 431 aaKnown RBP18.59■□□□□ 0.57
MCF2L-230ENST00000491028 ESRP1Q6NXG1 681 aaKnown RBP18.59■□□□□ 0.57
MCF2L-230ENST00000491028 SLC36A4Q6YBV0 504 aa18.59■□□□□ 0.57
MCF2L-230ENST00000491028 TECPR1Q7Z6L1 1165 aa18.59■□□□□ 0.57
MCF2L-230ENST00000491028 LONP2Q86WA8 852 aa18.59■□□□□ 0.57
MCF2L-230ENST00000491028 MAML2Q8IZL2 1156 aaPredicted RBP18.59■□□□□ 0.57
MCF2L-230ENST00000491028 GSDMBQ8TAX9 411 aa18.59■□□□□ 0.57
MCF2L-230ENST00000491028 DTX3LQ8TDB6 740 aa18.59■□□□□ 0.57
MCF2L-230ENST00000491028 DTD2Q96FN9 168 aa18.59■□□□□ 0.57
MCF2L-230ENST00000491028 SLC2A6Q9UGQ3 507 aa18.59■□□□□ 0.57
MCF2L-230ENST00000491028 APPL1Q9UKG1 709 aa18.59■□□□□ 0.57
MCF2L-230ENST00000491028 ZFR2Q9UPR6 939 aaKnown RBP18.59■□□□□ 0.57
MCF2L-230ENST00000491028 A0A1W2PQU0 124 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 FAM47DPA6NHR8 397 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 GPR37L1O60883 481 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 RECQL5O94762 991 aaPredicted RBP18.58■□□□□ 0.56
MCF2L-230ENST00000491028 GM2AP17900 193 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 PHBP35232 272 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 ETV3P41162 512 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 CCR5P51681 352 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 NUBP1P53384 320 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 PRAMEP78395 509 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 LONRF1Q17RB8 773 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 TMEM31Q5JXX7 168 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 SPDYCQ5MJ68 293 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 TSSK4Q6SA08 328 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 AFTPHQ6ULP2 937 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 CES3Q6UWW8 571 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 Q6ZVL8 140 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 HNRNPLLQ8WVV9 542 aaKnown RBP18.58■□□□□ 0.56
MCF2L-230ENST00000491028 RLN3Q8WXF3 142 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 NUS1Q96E22 293 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 CDKN2AIPNLQ96HQ2 116 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 TRIM56Q9BRZ2 755 aaKnown RBP18.58■□□□□ 0.56
MCF2L-230ENST00000491028 C1QTNF7Q9BXJ2 289 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 C1QTNF2Q9BXJ5 285 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 PLAC1Q9HBJ0 212 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 LRRC4CQ9HCJ2 640 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 BPIFA1Q9NP55 256 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 C11orf16Q9NQ32 467 aa18.58■□□□□ 0.56
MCF2L-230ENST00000491028 ARGLU1Q9NWB6 273 aaPredicted RBP18.58■□□□□ 0.56
MCF2L-230ENST00000491028 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.58■□□□□ 0.56
MCF2L-230ENST00000491028 FAM86C2PA6NEL3 165 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 PRR23AA6NEV1 266 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 IGLON5A6NGN9 336 aa18.57■□□□□ 0.56
MCF2L-230ENST00000491028 NDUFS2O75306 463 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms