RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CSTF2P33240 577 aaKnown RBP eCLIP4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 RPS9P46781 194 aaKnown RBP4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 YAP1P46937 504 aaKnown RBP4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 SOX9P48436 509 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 SERPINH1P50454 418 aaKnown RBP4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 CACNB3P54284 484 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 CNTN2Q02246 1040 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF45Q02386 682 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 KCNJ11Q14654 390 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 PLCL1Q15111 1095 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 LEXMQ3ZCV2 418 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 C1orf220Q5T0J3 134 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 PNCKQ6P2M8 343 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 MOXD1Q6UVY6 613 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 HACD2Q6Y1H2 254 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 C1orf186Q6ZWK4 172 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 CATSPER4Q7RTX7 472 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 PTAR1Q7Z6K3 402 aaPredicted RBP4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 EPHX4Q8IUS5 362 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 UNC45BQ8IWX7 931 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 ADGRG5Q8IZF4 528 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 OFCC1Q8IZS5 231 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 LINC00518Q8N0U6 118 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 METTL4Q8N3J2 472 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 LILRB2Q8N423 598 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF781Q8N8C0 355 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 OR13J1Q8NGT2 312 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 ACTL9Q8TC94 416 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 MAPK15Q8TD08 544 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 ANKRD49Q8WVL7 239 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 CPA5Q8WXQ8 436 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 GTF2H4Q92759 462 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 SNAPC3Q92966 411 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 COA7Q96BR5 231 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 UBXN10Q96LJ8 280 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 NT5C1BQ96P26 610 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 KCTD14Q9BQ13 255 aaPredicted RBP4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 MCMBPQ9BTE3 642 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 KIFC3Q9BVG8 833 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 ASPSCR1Q9BZE9 553 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 PDGFDQ9GZP0 370 aaPredicted RBP4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 ADNPQ9H2P0 1102 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 CPVLQ9H3G5 476 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 BRD7Q9NPI1 651 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 CHST12Q9NRB3 414 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 SMYD2Q9NRG4 433 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 TBC1D13Q9NVG8 400 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 UCKL1Q9NWZ5 548 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 B3GNT2Q9NY97 397 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 EIF3KQ9UBQ5 218 aaKnown RBP4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 SLCO3A1Q9UIG8 710 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 SNX7Q9UNH6 387 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 COQ4Q9Y3A0 265 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 A3GALT2U3KPV4 340 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 ARAP2Q8WZ64 1704 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 CNTNAP2Q9UHC6 1331 aa4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 RGPD8O14715 1765 aaPredicted RBP4.77□□□□□ -1.65
SNRNP40-206ENST00000489853 TNS1Q9HBL0 1735 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 A8MX80 341 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF99A8MXY4 864 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 SPATA31C2B4DYI2 1134 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 TCP10L2B9ZVM9 353 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 H0Y626 953 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 H3BMM5 538 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 SNAP23O00161 211 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 CTDSP2O14595 271 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 NRP1O14786 923 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 MMP20O60882 483 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF780AO75290 641 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 SERPINI2O75830 405 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 CDK14O94921 469 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 GH2P01242 217 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 SLC4A1P02730 911 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ITGB3P05106 788 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 PRKCGP05129 697 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 CSH1P0DML2 217 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 CSH2P0DML3 217 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ADORA2AP29274 412 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ERP29P30040 261 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 AXLP30530 894 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 GPC1P35052 558 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 GRIA4P48058 902 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 RPL14P50914 215 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF157P51786 506 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 BLVRAP53004 296 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 PSMC5P62195 406 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 SNRPFP62306 86 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 YWHAZP63104 245 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 S100A12P80511 92 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 RHAGQ02094 409 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 SPIRE1Q08AE8 756 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 BAMBIQ13145 260 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 SQLEQ14534 574 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ACOX1Q15067 660 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 KIZQ2M2Z5 673 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 ADPRMQ3LIE5 342 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 Q5BKY6 102 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 CATSPEREQ5SY80 951 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 KIAA0319Q5VV43 1072 aa4.76□□□□□ -1.65
SNRNP40-206ENST00000489853 SEL1L3Q68CR1 1132 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms