RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 LRRC40Q9H9A6 602 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 ZFYVE1Q9HBF4 777 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 ARNT2Q9HBZ2 717 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 FSCN3Q9NQT6 498 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 MBNL1Q9NR56 388 aaKnown RBP11.07□□□□□ -0.64
CPSF7-212ENST00000489728 UBP1Q9NZI7 540 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.07□□□□□ -0.64
CPSF7-212ENST00000489728 PKD2L2Q9NZM6 624 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 PAK5Q9P286 719 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 FNDC3AQ9Y2H6 1198 aaKnown RBP11.07□□□□□ -0.64
CPSF7-212ENST00000489728 COQ6Q9Y2Z9 468 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 ZNF711Q9Y462 761 aa11.07□□□□□ -0.64
CPSF7-212ENST00000489728 CTAGE9A4FU28 777 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 A8MX80 341 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 H3BM21 787 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 CACNB4O00305 520 aaPredicted RBP11.06□□□□□ -0.64
CPSF7-212ENST00000489728 AP2A1O95782 977 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 CSF2P04141 144 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 PCCBP05166 539 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 C1SP09871 688 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 CD59P13987 128 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 NME1P15531 152 aaKnown RBP11.06□□□□□ -0.64
CPSF7-212ENST00000489728 EPHA8P29322 1005 aaPredicted RBP11.06□□□□□ -0.64
CPSF7-212ENST00000489728 HMGCLP35914 325 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 ETV3P41162 512 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 GRK6P43250 576 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 SPINT3P49223 89 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 BLKP51451 505 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 HNRNPKP61978 463 aaKnown RBP eCLIP11.06□□□□□ -0.64
CPSF7-212ENST00000489728 PDE1BQ01064 536 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 SEMG2Q02383 582 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 PDE1CQ14123 709 aaPredicted RBP11.06□□□□□ -0.64
CPSF7-212ENST00000489728 FZD2Q14332 565 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 INPP5AQ14642 412 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 KCTD11Q693B1 232 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 PDPK2PQ6A1A2 396 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 ADAMTSL4Q6UY14 1074 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 Q6ZVL8 140 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 TMC3Q7Z5M5 1100 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 PIP4P1Q86T03 277 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 LINC00523Q86TU6 105 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 PRELID2Q8N945 189 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 PLEKHG4BQ96PX9 1271 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 APOOQ9BUR5 198 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 TEX101Q9BY14 249 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 PHPT1Q9NRX4 125 aaPredicted RBP11.06□□□□□ -0.64
CPSF7-212ENST00000489728 RNF14Q9UBS8 474 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 CA5BQ9Y2D0 317 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 COL5A1P20908 1838 aaPredicted RBP11.06□□□□□ -0.64
CPSF7-212ENST00000489728 TMEM131Q92545 1883 aa11.06□□□□□ -0.64
CPSF7-212ENST00000489728 AP3B1O00203 1094 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 TNFRSF10CO14798 259 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 SUN1O94901 812 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 CLDN7O95471 211 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 METTL18O95568 372 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 IFNB1P01574 187 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 MYCLP1P12525 358 aaPredicted RBP11.05□□□□□ -0.64
CPSF7-212ENST00000489728 ID4P47928 161 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 FNTAP49354 379 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 SEMA5AQ13591 1074 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 SNX1Q13596 522 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 HENMT1Q5T8I9 393 aaKnown RBP11.05□□□□□ -0.64
CPSF7-212ENST00000489728 LYSMD3Q7Z3D4 306 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 KDELC2Q7Z4H8 507 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 NAXDQ8IW45 347 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 SDR16C5Q8N3Y7 309 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 OR2I1PQ8NGU4 316 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 SAP25Q8TEE9 199 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 COG1Q8WTW3 980 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 AP2M1Q96CW1 435 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 WDR92Q96MX6 357 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 WDR24Q96S15 920 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 TBL1YQ9BQ87 522 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 ZSCAN5AQ9BUG6 496 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 FICDQ9BVA6 458 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 GPR63Q9BZJ6 419 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 ABCG8Q9H221 673 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 SLC32A1Q9H598 525 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 IL21RQ9HBE5 538 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 EIF2B3Q9NR50 452 aaKnown RBP11.05□□□□□ -0.64
CPSF7-212ENST00000489728 SAR1BQ9Y6B6 198 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 CSNK1G3Q9Y6M4 447 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 DGKBQ9Y6T7 804 aa11.05□□□□□ -0.64
CPSF7-212ENST00000489728 C2orf81A6NN90 581 aa11.04□□□□□ -0.64
CPSF7-212ENST00000489728 PHF2O75151 1096 aa11.04□□□□□ -0.64
CPSF7-212ENST00000489728 RASGRP1O95267 797 aa11.04□□□□□ -0.64
CPSF7-212ENST00000489728 CRTAMO95727 393 aa11.04□□□□□ -0.64
CPSF7-212ENST00000489728 AGTP01019 485 aa11.04□□□□□ -0.64
CPSF7-212ENST00000489728 CEACAM1P13688 526 aa11.04□□□□□ -0.64
CPSF7-212ENST00000489728 CHRNA4P43681 627 aa11.04□□□□□ -0.64
CPSF7-212ENST00000489728 ETF1P62495 437 aaKnown RBP11.04□□□□□ -0.64
CPSF7-212ENST00000489728 CDK16Q00536 496 aa11.04□□□□□ -0.64
CPSF7-212ENST00000489728 LAMB3Q13751 1172 aa11.04□□□□□ -0.64
CPSF7-212ENST00000489728 PTPRRQ15256 657 aa11.04□□□□□ -0.64
CPSF7-212ENST00000489728 SHBQ15464 509 aa11.04□□□□□ -0.64
CPSF7-212ENST00000489728 TAF1AQ15573 450 aaPredicted RBP11.04□□□□□ -0.64
CPSF7-212ENST00000489728 UAP1L1Q3KQV9 507 aa11.04□□□□□ -0.64
CPSF7-212ENST00000489728 ARMC3Q5W041 872 aa11.04□□□□□ -0.64
CPSF7-212ENST00000489728 DENND2CQ68D51 928 aa11.04□□□□□ -0.64
CPSF7-212ENST00000489728 RAET1GQ6H3X3 334 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms