RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 PFKPQ01813 784 aa21.63■■□□□ 1.05
SMC4-221ENST00000489573 SLC18A2Q05940 514 aa21.63■■□□□ 1.05
SMC4-221ENST00000489573 PON2Q15165 354 aa21.63■■□□□ 1.05
SMC4-221ENST00000489573 POM121L1PQ3SYA9 428 aa21.63■■□□□ 1.05
SMC4-221ENST00000489573 FASTKD1Q53R41 847 aaKnown RBP21.63■■□□□ 1.05
SMC4-221ENST00000489573 LRRC73Q5JTD7 316 aa21.63■■□□□ 1.05
SMC4-221ENST00000489573 SH2D5Q6ZV89 423 aa21.63■■□□□ 1.05
SMC4-221ENST00000489573 DCLK2Q8N568 766 aa21.63■■□□□ 1.05
SMC4-221ENST00000489573 GPR22Q99680 433 aa21.63■■□□□ 1.05
SMC4-221ENST00000489573 FBXO6Q9NRD1 293 aaPredicted RBP21.63■■□□□ 1.05
SMC4-221ENST00000489573 SARDHQ9UL12 918 aa21.63■■□□□ 1.05
SMC4-221ENST00000489573 MTO1Q9Y2Z2 717 aaKnown RBP21.63■■□□□ 1.05
SMC4-221ENST00000489573 PRUNE2Q8WUY3 3088 aa21.63■■□□□ 1.05
SMC4-221ENST00000489573 C5orf42Q9H799 3197 aa21.62■■□□□ 1.05
SMC4-221ENST00000489573 ALDOAP04075 364 aaKnown RBP21.62■■□□□ 1.05
SMC4-221ENST00000489573 LHCGRP22888 699 aa21.62■■□□□ 1.05
SMC4-221ENST00000489573 VIPR1P32241 457 aa21.62■■□□□ 1.05
SMC4-221ENST00000489573 FOXN2P32314 431 aa21.62■■□□□ 1.05
SMC4-221ENST00000489573 TIE1P35590 1138 aa21.62■■□□□ 1.05
SMC4-221ENST00000489573 CCNFP41002 786 aa21.62■■□□□ 1.05
SMC4-221ENST00000489573 SEMG2Q02383 582 aa21.62■■□□□ 1.05
SMC4-221ENST00000489573 PPARDQ03181 441 aa21.62■■□□□ 1.05
SMC4-221ENST00000489573 TMEM196Q5HYL7 178 aa21.62■■□□□ 1.05
SMC4-221ENST00000489573 PARS2Q7L3T8 475 aaKnown RBP21.62■■□□□ 1.05
SMC4-221ENST00000489573 SDCCAG8Q86SQ7 713 aaPredicted RBP21.62■■□□□ 1.05
SMC4-221ENST00000489573 MDM1Q8TC05 714 aa21.62■■□□□ 1.05
SMC4-221ENST00000489573 ACMSDQ8TDX5 336 aa21.62■■□□□ 1.05
SMC4-221ENST00000489573 SCG3Q8WXD2 468 aaKnown RBP21.62■■□□□ 1.05
SMC4-221ENST00000489573 ISL2Q96A47 359 aa21.62■■□□□ 1.05
SMC4-221ENST00000489573 PBXIP1Q96AQ6 731 aa21.62■■□□□ 1.05
SMC4-221ENST00000489573 PPP1R16AQ96I34 528 aa21.62■■□□□ 1.05
SMC4-221ENST00000489573 PCDH12Q9NPG4 1184 aa21.62■■□□□ 1.05
SMC4-221ENST00000489573 TCF20Q9UGU0 1960 aaKnown RBP21.61■■□□□ 1.05
SMC4-221ENST00000489573 FAM47DPA6NHR8 397 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 C1QTNF3-AMACRE9PGA6 284 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 TPP1O14773 563 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 NARSO43776 548 aaKnown RBP21.61■■□□□ 1.05
SMC4-221ENST00000489573 TYROBPO43914 113 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 EGFP01133 1207 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 GLULP15104 373 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 CHN1P15882 459 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 ZNF30P17039 623 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 DRD1P21728 446 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 WASP42768 502 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 SERPINB8P50452 374 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 GRSF1Q12849 480 aaKnown RBP eCLIP21.61■■□□□ 1.052e-14■■■■■ 48.8
SMC4-221ENST00000489573 PEX6Q13608 980 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 SEMA3AQ14563 771 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 TYSND1Q2T9J0 566 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 TTC7BQ86TV6 843 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 LDB1Q86U70 411 aaPredicted RBP21.61■■□□□ 1.05
SMC4-221ENST00000489573 BANPQ8N9N5 519 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 MSANTD3Q96H12 275 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 APOPT1Q96IL0 206 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 NKIRAS1Q9NYS0 192 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 FNDC3AQ9Y2H6 1198 aaKnown RBP21.61■■□□□ 1.05
SMC4-221ENST00000489573 HAUS5O94927 633 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 S1PR4O95977 384 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 IL1BP01584 269 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 CHRM1P11229 460 aaPredicted RBP21.61■■□□□ 1.05
SMC4-221ENST00000489573 IL9P15248 144 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 SLC18A1P54219 525 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 XIAPP98170 497 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 ILF2Q12905 390 aaKnown RBP21.61■■□□□ 1.05
SMC4-221ENST00000489573 ARHGEF7Q14155 803 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 ERAP2Q6P179 960 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 CBARPQ8N350 705 aaPredicted RBP21.61■■□□□ 1.05
SMC4-221ENST00000489573 ANKRD42Q8N9B4 389 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 KCNV2Q8TDN2 545 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 ARRDC3Q96B67 414 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 SLC2A4RGQ9NR83 387 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 PCMTD2Q9NV79 361 aa21.61■■□□□ 1.05
SMC4-221ENST00000489573 C1SP09871 688 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 SRFP11831 508 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 BPIP17213 487 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 PMLP29590 882 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 TYK2P29597 1187 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 SPAM1P38567 509 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 MDH1P40925 334 aaKnown RBP21.6■■□□□ 1.05
SMC4-221ENST00000489573 MAGEA12P43365 314 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 POLD2P49005 469 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 CLCN5P51795 746 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 STC1P52823 247 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 PTPN5P54829 565 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 PTSQ03393 145 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 CAMK2GQ13555 558 aaPredicted RBP21.6■■□□□ 1.05
SMC4-221ENST00000489573 TDGQ13569 410 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 MPP2Q14168 576 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 ZRANB3Q5FWF4 1079 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 ZNF789Q5FWF6 425 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 CNSTQ6PJW8 725 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 DPPA4Q7L190 304 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 MMAAQ8IVH4 418 aaKnown RBP21.6■■□□□ 1.05
SMC4-221ENST00000489573 DYRK4Q9NR20 520 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 SNX15Q9NRS6 342 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 MKS1Q9NXB0 559 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 APPL1Q9UKG1 709 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 SLC30A1Q9Y6M5 507 aa21.6■■□□□ 1.05
SMC4-221ENST00000489573 FAM95CA0A1B0GW59 222 aa21.59■■□□□ 1.05
SMC4-221ENST00000489573 LOC730098B7Z3J9 87 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms