RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 POLD2P49005 469 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 RPIAP49247 311 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 CDK3Q00526 305 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 PPIDQ08752 370 aaKnown RBP14□□□□□ -0.17
VTI1A-206ENST00000489142 RTP5Q14D33 572 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 ODF2Q5BJF6 829 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 SLC9A4Q6AI14 798 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 ALG1LQ6GMV1 187 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 MFSD7Q6UXD7 560 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 CBARPQ8N350 705 aaPredicted RBP14□□□□□ -0.17
VTI1A-206ENST00000489142 CNTD1Q8N815 330 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 ARL10Q8N8L6 244 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 SCG3Q8WXD2 468 aaKnown RBP14□□□□□ -0.17
VTI1A-206ENST00000489142 SCAMP4Q969E2 229 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 MAK16Q9BXY0 300 aaKnown RBP14□□□□□ -0.17
VTI1A-206ENST00000489142 BRD8Q9H0E9 1235 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 ABCG8Q9H221 673 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 CARS2Q9HA77 564 aaKnown RBP14□□□□□ -0.17
VTI1A-206ENST00000489142 PHPT1Q9NRX4 125 aaPredicted RBP14□□□□□ -0.17
VTI1A-206ENST00000489142 DGKBQ9Y6T7 804 aa14□□□□□ -0.17
VTI1A-206ENST00000489142 FAM208BQ5VWN6 2430 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 A0A1W2PNU3 283 aaPredicted RBP13.99□□□□□ -0.17
VTI1A-206ENST00000489142 CLDN7O95471 211 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 KRT10P13645 584 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 NFKBIAP25963 317 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 ITPKBP27987 946 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 GNPDA1P46926 289 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 GABREP78334 506 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 PTSQ03393 145 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 GALNT3Q14435 633 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 ISXQ2M1V0 245 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 C3orf38Q5JPI3 329 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 KDELC2Q7Z4H8 507 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 TECPR1Q7Z6L1 1165 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 RHOT1Q8IXI2 618 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 FAM46DQ8NEK8 389 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 NAT6Q93015 286 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 ATXN7L3BQ96GX2 97 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 AGAP3Q96P47 875 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 AGAP2Q99490 1192 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 TEX101Q9BY14 249 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 PCDH9Q9HC56 1237 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 SAE1Q9UBE0 346 aaPredicted RBP13.99□□□□□ -0.17
VTI1A-206ENST00000489142 INTUQ9ULD6 942 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 SUFUQ9UMX1 484 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 TMEM98Q9Y2Y6 226 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 PPIL1Q9Y3C6 166 aa13.99□□□□□ -0.17
VTI1A-206ENST00000489142 ZFC3H1O60293 1989 aaKnown RBP13.99□□□□□ -0.17
VTI1A-206ENST00000489142 CAPN8A6NHC0 703 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 SOWAHDA6NJG2 315 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 PSMD11O00231 422 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 AGRPO00253 132 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 TNFRSF10CO14798 259 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 INPP4BO15327 924 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 SOD1P00441 154 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 CEACAM5P06731 702 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 HOXC4P09017 264 aaPredicted RBP13.98□□□□□ -0.17
VTI1A-206ENST00000489142 KELP23276 732 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 AK4P27144 223 aaPredicted RBP13.98□□□□□ -0.17
VTI1A-206ENST00000489142 GPR1P46091 355 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 MARCKSL1P49006 195 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 ZNF75DP51815 510 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 PDX1P52945 283 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 IFI35P80217 286 aaPredicted RBP13.98□□□□□ -0.17
VTI1A-206ENST00000489142 SKOR1P84550 965 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 PCSK7Q16549 785 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 KAZNQ674X7 775 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 FOXR1Q6PIV2 292 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 LVRNQ6Q4G3 990 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 RBM44Q6ZP01 1051 aaKnown RBP13.98□□□□□ -0.17
VTI1A-206ENST00000489142 CACTIN-AS1Q8N1I8 211 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 SDR16C5Q8N3Y7 309 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 Q8N9G6 341 aaPredicted RBP13.98□□□□□ -0.17
VTI1A-206ENST00000489142 FATE1Q969F0 183 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 AP2M1Q96CW1 435 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 NAF1Q96HR8 494 aaKnown RBP13.98□□□□□ -0.17
VTI1A-206ENST00000489142 OLFM3Q96PB7 478 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 RIOK2Q9BVS4 552 aaKnown RBP13.98□□□□□ -0.17
VTI1A-206ENST00000489142 FRMD8Q9BZ67 464 aaPredicted RBP13.98□□□□□ -0.17
VTI1A-206ENST00000489142 DPEP2Q9H4A9 486 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 AMACRQ9UHK6 382 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 SATB2Q9UPW6 733 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 PLEKHM1Q9Y4G2 1056 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 PCDHA13Q9Y5I0 950 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 ENTPD2Q9Y5L3 495 aa13.98□□□□□ -0.17
VTI1A-206ENST00000489142 C1orf232A0A0U1RR37 186 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 ZNF487B1APH4 448 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 F5H423 210 aaPredicted RBP13.97□□□□□ -0.17
VTI1A-206ENST00000489142 NOBOXO60393 691 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 SLC4A1P02730 911 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 PIRTP0C851 137 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 PECAM1P16284 738 aaPredicted RBP13.97□□□□□ -0.17
VTI1A-206ENST00000489142 CA4P22748 312 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 CES1P23141 567 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 EIF2S3P41091 472 aaKnown RBP13.97□□□□□ -0.17
VTI1A-206ENST00000489142 CDKN2BP42772 138 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 SLC1A1P43005 524 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 STC1P52823 247 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 CCL7P80098 99 aa13.97□□□□□ -0.17
VTI1A-206ENST00000489142 ADCY2Q08462 1091 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms