RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 ZFR2Q9UPR6 939 aaKnown RBP12.31□□□□□ -0.44
TRAIP-209ENST00000488860 ZNF318Q5VUA4 2279 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 CCDC163A0A0D9SF12 145 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 MEI4A8MW99 385 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 E7ESA3 106 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 PSMD11O00231 422 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 WNT9AO14904 365 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 EIF3HO15372 352 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRAIP-209ENST00000488860 RECQL5O94762 991 aaPredicted RBP12.3□□□□□ -0.44
TRAIP-209ENST00000488860 PCCBP05166 539 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 PGAM1P18669 254 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 NMBRP28336 390 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 HOXA6P31267 233 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 HMGCLP35914 325 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 SGCGQ13326 291 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 KIAA0895LQ68EN5 471 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 WDR93Q6P2C0 686 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 FAM151BQ6UXP7 276 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 SLC36A4Q6YBV0 504 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 CEP128Q6ZU80 1094 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 Q6ZVL8 140 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 MICALCLQ6ZW33 695 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 ARMCX6Q7L4S7 300 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 TRIM69Q86WT6 500 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 IGDCC3Q8IVU1 814 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 ABCA7Q8IZY2 2146 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 PYROXD1Q8WU10 500 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 PTCD2Q8WV60 388 aaKnown RBP12.3□□□□□ -0.44
TRAIP-209ENST00000488860 EID2BQ96D98 161 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 LRRC39Q96DD0 335 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 C9orf72Q96LT7 481 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 COQ10AQ96MF6 247 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 ZNF778Q96MU6 729 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 EBNA1BP2Q99848 306 aaKnown RBP12.3□□□□□ -0.44
TRAIP-209ENST00000488860 MRM3Q9HC36 420 aaKnown RBP12.3□□□□□ -0.44
TRAIP-209ENST00000488860 FZD3Q9NPG1 666 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 IL17CQ9P0M4 197 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 ZC3H7BQ9UGR2 993 aaKnown RBP12.3□□□□□ -0.44
TRAIP-209ENST00000488860 FKBPLQ9UIM3 349 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.3□□□□□ -0.44
TRAIP-209ENST00000488860 TEX264Q9Y6I9 313 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 RPS6KL1Q9Y6S9 549 aa12.3□□□□□ -0.44
TRAIP-209ENST00000488860 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 MROH6A6NGR9 719 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 SLC31A1O15431 190 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 GALR2O43603 387 aaPredicted RBP12.29□□□□□ -0.44
TRAIP-209ENST00000488860 RPP40O75818 363 aaKnown RBP12.29□□□□□ -0.44
TRAIP-209ENST00000488860 FAM153BP0C7A2 387 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 SP9P0CG40 484 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 BPIP17213 487 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 GM2AP17900 193 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 PAMP19021 973 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 SPAM1P38567 509 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 MAGEA4P43358 317 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 SPINT3P49223 89 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 PRAMEP78395 509 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 SKIDA1Q1XH10 827 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 ZNF284Q2VY69 593 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 FAM153CQ494X1 144 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 TMEM259Q4ZIN3 620 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 RAET1GQ6H3X3 334 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 ESRP1Q6NXG1 681 aaKnown RBP12.29□□□□□ -0.44
TRAIP-209ENST00000488860 NEK5Q6P3R8 708 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 CCNI2Q6ZMN8 369 aaPredicted RBP12.29□□□□□ -0.44
TRAIP-209ENST00000488860 NLRP9Q7RTR0 991 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 PALM2Q8IXS6 379 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 TMEFF1Q8IYR6 380 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 OTUD6BQ8N6M0 293 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 GAB3Q8WWW8 586 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 MFSD3Q96ES6 412 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 DTD2Q96FN9 168 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 HSPA12BQ96MM6 686 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 KIFC1Q9BW19 673 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 C1QTNF7Q9BXJ2 289 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 PHACTR1Q9C0D0 580 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 TSPYL1Q9H0U9 437 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 NLE1Q9NVX2 485 aaPredicted RBP12.29□□□□□ -0.44
TRAIP-209ENST00000488860 IL1RAPL1Q9NZN1 696 aa12.29□□□□□ -0.44
TRAIP-209ENST00000488860 FAM237BA0A1B0GVD1 139 aa12.28□□□□□ -0.44
TRAIP-209ENST00000488860 OR51F1A6NGY5 319 aa12.28□□□□□ -0.44
TRAIP-209ENST00000488860 USP1O94782 785 aa12.28□□□□□ -0.44
TRAIP-209ENST00000488860 PAK4O96013 591 aaPredicted RBP12.28□□□□□ -0.44
TRAIP-209ENST00000488860 POLBP06746 335 aa12.28□□□□□ -0.44
TRAIP-209ENST00000488860 MC4RP32245 332 aa12.28□□□□□ -0.44
TRAIP-209ENST00000488860 HADHAP40939 763 aa12.28□□□□□ -0.44
TRAIP-209ENST00000488860 ARSDP51689 593 aa12.28□□□□□ -0.44
TRAIP-209ENST00000488860 FGL2Q14314 439 aa12.28□□□□□ -0.44
TRAIP-209ENST00000488860 CRYMQ14894 314 aa12.28□□□□□ -0.44
TRAIP-209ENST00000488860 IRF4Q15306 451 aa12.28□□□□□ -0.44
TRAIP-209ENST00000488860 ANKRD20A4Q4UJ75 823 aa12.28□□□□□ -0.44
TRAIP-209ENST00000488860 SETMARQ53H47 684 aaPredicted RBP12.28□□□□□ -0.44
TRAIP-209ENST00000488860 ZRANB3Q5FWF4 1079 aa12.28□□□□□ -0.44
TRAIP-209ENST00000488860 SPANXN3Q5MJ09 141 aa12.28□□□□□ -0.44
TRAIP-209ENST00000488860 AFTPHQ6ULP2 937 aa12.28□□□□□ -0.44
TRAIP-209ENST00000488860 UNC5AQ6ZN44 842 aa12.28□□□□□ -0.44
TRAIP-209ENST00000488860 CEP68Q76N32 757 aa12.28□□□□□ -0.44
TRAIP-209ENST00000488860 NRSN1Q8IZ57 195 aa12.28□□□□□ -0.44
TRAIP-209ENST00000488860 EIF1ADQ8N9N8 165 aaKnown RBP12.28□□□□□ -0.44
TRAIP-209ENST00000488860 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRAIP-209ENST00000488860 GPR26Q8NDV2 337 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms