RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 COL27A1Q8IZC6 1860 aaPredicted RBP13.06□□□□□ -0.32
ATPAF2-207ENST00000488753 RP1P56715 2156 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 MATN3O15232 486 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 KLK10O43240 276 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 ZW10O43264 779 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 MFSD11O43934 449 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 TNFSF15O95150 251 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 CEACAM5P06731 702 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 PYGLP06737 847 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 H2AFZP0C0S5 128 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 CCNB1P14635 433 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 ZNF30P17039 623 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 CA4P22748 312 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 CASP14P31944 242 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 MAN1A1P33908 653 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 ETV3P41162 512 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 INHBCP55103 352 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 RPL26P61254 145 aaKnown RBP13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 CXADRP78310 365 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 ILF3Q12906 894 aaKnown RBP eCLIP13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 MMRN1Q13201 1228 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 TRIM14Q14142 442 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 TCEA2Q15560 299 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 SLC18A3Q16572 532 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 SPECC1LQ69YQ0 1117 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 Q6ZVL8 140 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 H2AFVQ71UI9 128 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 ZNF765Q7L2R6 523 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 SPRED1Q7Z699 444 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 TECPR1Q7Z6L1 1165 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 B3GNT8Q7Z7M8 397 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 C17orf82Q86X59 251 aaPredicted RBP13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 KCTD6Q8NC69 237 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 CTNNBL1Q8WYA6 563 aaPredicted RBP13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 SLC39A7Q92504 469 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 FAF2Q96CS3 445 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 WBP1Q96G27 269 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 GSDMCQ9BYG8 508 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 CARS2Q9HA77 564 aaKnown RBP13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 NT5MQ9NPB1 228 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 CTTNBP2NLQ9P2B4 639 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 LRIT1Q9P2V4 623 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 ACSL6Q9UKU0 697 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 RPL26L1Q9UNX3 145 aaKnown RBP13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 SLC17A4Q9Y2C5 497 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 LRRK1Q38SD2 2015 aa13.05□□□□□ -0.32
ATPAF2-207ENST00000488753 LRP4O75096 1905 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 SSU72P8A0A1W2PR75 194 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 B4DGG1 531 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 ERVH48-1M5A8F1 160 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 CASC3O15234 703 aaKnown RBP13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 IVLP07476 585 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 PDHA1P08559 390 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 RHDQ02161 417 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 ZFP36L1Q07352 338 aaKnown RBP13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 ITKQ08881 620 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 CLPPQ16740 277 aaPredicted RBP13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 ANKRD20A8PQ5CZ79 823 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 DENND2CQ68D51 928 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 RAET1GQ6H3X3 334 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 ADAMTSL4Q6UY14 1074 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 RAB11FIP2Q7L804 512 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 ZNF438Q7Z4V0 828 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 TSPAN33Q86UF1 283 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 FBXO39Q8N4B4 442 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 OR8K1Q8NGG5 319 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 CCL4L1Q8NHW4 92 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 HDAC11Q96DB2 347 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 SCARF2Q96GP6 870 aaPredicted RBP13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 DNAJC7Q99615 494 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 TDRD1Q9BXT4 1180 aaKnown RBP13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 XPO4Q9C0E2 1151 aaKnown RBP13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 EPB41L5Q9HCM4 733 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 MOSPD1Q9UJG1 213 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 SUFUQ9UMX1 484 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 RNF215Q9Y6U7 377 aa13.04□□□□□ -0.32
ATPAF2-207ENST00000488753 A0A0J9YYE9 177 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 CAPN8A6NHC0 703 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 ZNF487B1APH4 448 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 TRBC1P01850 177 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 FUCA1P04066 466 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 TMEM253P0C7T8 217 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 CTPS1P17812 591 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 UGT1A5P35504 534 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 GPR1P46091 355 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 EPHB1P54762 984 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 VAC14Q08AM6 782 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 NR1D2Q14995 579 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 ASTE1Q2TB18 679 aaPredicted RBP13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 ZSCAN23Q3MJ62 389 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 ATP13A4Q4VNC1 1196 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 LRRC66Q68CR7 880 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 FOXR1Q6PIV2 292 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 VSIG1Q86XK7 387 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 NRROSQ86YC3 692 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 NRSN1Q8IZ57 195 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 ZDHHC1Q8WTX9 485 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 AP2M1Q96CW1 435 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 LYSMD1Q96S90 227 aa13.03□□□□□ -0.32
ATPAF2-207ENST00000488753 FOXP3Q9BZS1 431 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms