RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 FGF22Q9HCT0 170 aa15.93■□□□□ 0.14
CTDSP1-209ENST00000488627 DGKBQ9Y6T7 804 aa15.93■□□□□ 0.14
CTDSP1-209ENST00000488627 COL5A1P20908 1838 aaPredicted RBP15.93■□□□□ 0.14
CTDSP1-209ENST00000488627 CACNB4O00305 520 aaPredicted RBP15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 TNFRSF10CO14798 259 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 YY2O15391 372 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 ARHGAP6O43182 974 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 RFPL3O75679 317 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 RASGRP1O95267 797 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 FUCA1P04066 466 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 CKMT1AP12532 417 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 BLKP51451 505 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 CDK18Q07002 472 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 ILKQ13418 452 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 DEFB133Q30KQ1 61 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 CCDC157Q569K6 752 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 KDELC2Q7Z4H8 507 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 MARCH9Q86YJ5 346 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 LRRC8AQ8IWT6 810 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 RAVER1Q8IY67 606 aaKnown RBP15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 SYCE1Q8N0S2 351 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 ZNF567Q8N184 647 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 OR56A4Q8NGH8 313 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 HTR3CQ8WXA8 447 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 SCAMP4Q969E2 229 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 PDXPQ96GD0 296 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 HES6Q96HZ4 224 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 VAT1Q99536 393 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 ADGRE3Q9BY15 652 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 KLQ9UEF7 1012 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 DNPEPQ9ULA0 475 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 SHROOM3Q8TF72 1996 aa15.92■□□□□ 0.14
CTDSP1-209ENST00000488627 CHD8Q9HCK8 2581 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 CEP295Q9C0D2 2601 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 MIF4GDA9UHW6 222 aaKnown RBP15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 C1QTNF9BB2RNN3 333 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 C1QTNF9P0C862 333 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 ALPPL2P10696 532 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 CDK4P11802 303 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 MYCLP1P12525 358 aaPredicted RBP15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 NFKB1P19838 968 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 RBL1P28749 1068 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 CDK3Q00526 305 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 OTUD4Q01804 1114 aaKnown RBP15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 GALNT3Q14435 633 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 ZCCHC8Q6NZY4 707 aaKnown RBP15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 KDELC1Q6UW63 502 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 ZNF765Q7L2R6 523 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 PID1Q7Z2X4 250 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 RD3Q7Z3Z2 195 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 HEATR4Q86WZ0 1026 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 NRSN1Q8IZ57 195 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 ATL2Q8NHH9 583 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 OXNAD1Q96HP4 312 aaPredicted RBP15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 FCRL5Q96RD9 977 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 AGAP2Q99490 1192 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 BOCQ9BWV1 1114 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 MRPL40Q9NQ50 206 aaKnown RBP15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 CD84Q9UIB8 345 aa15.91■□□□□ 0.14
CTDSP1-209ENST00000488627 C1orf232A0A0U1RR37 186 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 LOC285095A0A1B0GVY8 99 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 PDE2AO00408 941 aaPredicted RBP15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 PMPCBO75439 489 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 TJP3O95049 919 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 NDST3O95803 873 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 TNFP01375 233 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 CAPNS1P04632 268 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 CEACAM5P06731 702 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 KELP23276 732 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 SPINT3P49223 89 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 CLDN6P56747 220 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 CCZ1BP86790 482 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 CCZ1P86791 482 aaPredicted RBP15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 KLF1Q13351 362 aaPredicted RBP15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 PCSK7Q16549 785 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 HS1BP3Q53T59 392 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 LVRNQ6Q4G3 990 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 ADAMTSL4Q6UY14 1074 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 ZNF662Q6ZS27 426 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 TMPRSS12Q86WS5 348 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 SDR16C5Q8N3Y7 309 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 FSTL5Q8N475 847 aaPredicted RBP15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 CCDC112Q8NEF3 446 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 PTCD2Q8WV60 388 aaKnown RBP15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 AP2M1Q96CW1 435 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 FAM118BQ9BPY3 351 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 GORASP1Q9BQQ3 440 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 RIOK2Q9BVS4 552 aaKnown RBP15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 FRMD8Q9BZ67 464 aaPredicted RBP15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 TSGA10Q9BZW7 698 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 USP29Q9HBJ7 922 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 MAGEE1Q9HCI5 957 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 PHPT1Q9NRX4 125 aaPredicted RBP15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 UBP1Q9NZI7 540 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 KLHL8Q9P2G9 620 aaPredicted RBP15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 FAM153AQ9UHL3 310 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 TRHDEQ9UKU6 1024 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 GUCA1BQ9UMX6 200 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 LRRK1Q38SD2 2015 aa15.9■□□□□ 0.14
CTDSP1-209ENST00000488627 FAM149AA5PLN7 773 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms