RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 TUBD1Q9UJT1 453 aa19.42■□□□□ 0.7
SMPDL3A-202ENST00000487215 ARHGEF17Q96PE2 2063 aaPredicted RBP19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 EIF3CLB5ME19 914 aaKnown RBP19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 DAPK3O43293 454 aa19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 HTRA2O43464 458 aaPredicted RBP19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 RAD1O60671 282 aa19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 DESP17661 470 aa19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 LHCGRP22888 699 aa19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 VIPR1P32241 457 aa19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 CSTF2P33240 577 aaKnown RBP eCLIP19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 ADCY8P40145 1251 aa19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 ETV3P41162 512 aa19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 POLD2P49005 469 aa19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 RENBPP51606 427 aa19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 SQSTM1Q13501 440 aa19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 CT47A1Q5JQC4 288 aaPredicted RBP19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 HSD11B1LQ7Z5J1 315 aa19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 TP53INP2Q8IXH6 220 aa19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 MCOLN2Q8IZK6 566 aa19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 ENOX1Q8TC92 643 aaKnown RBP19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 PEBP4Q96S96 227 aa19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 EIF3CQ99613 913 aaKnown RBP19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 SNRNP25Q9BV90 132 aaKnown RBP19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 OCIAD1Q9NX40 245 aa19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 KCTD5Q9NXV2 234 aa19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 SLC39A1Q9NY26 324 aa19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 SLC17A4Q9Y2C5 497 aa19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 PCDHGC4Q9Y5F7 938 aa19.41■□□□□ 0.7
SMPDL3A-202ENST00000487215 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.4■□□□□ 0.7
SMPDL3A-202ENST00000487215 ZNF891A8MT65 544 aaPredicted RBP19.4■□□□□ 0.7
SMPDL3A-202ENST00000487215 SOCS5O75159 536 aa19.4■□□□□ 0.7
SMPDL3A-202ENST00000487215 CPP00450 1065 aa19.4■□□□□ 0.7
SMPDL3A-202ENST00000487215 IVLP07476 585 aa19.4■□□□□ 0.7
SMPDL3A-202ENST00000487215 TPM2P07951 284 aa19.4■□□□□ 0.7
SMPDL3A-202ENST00000487215 PSMA2P25787 234 aa19.4■□□□□ 0.7
SMPDL3A-202ENST00000487215 CCR10P46092 362 aa19.4■□□□□ 0.7
SMPDL3A-202ENST00000487215 SLC10A7Q0GE19 358 aa19.4■□□□□ 0.7
SMPDL3A-202ENST00000487215 LBRQ14739 615 aaKnown RBP19.4■□□□□ 0.7
SMPDL3A-202ENST00000487215 ERMARDQ5T6L9 678 aa19.4■□□□□ 0.7
SMPDL3A-202ENST00000487215 TMCO4Q5TGY1 634 aa19.4■□□□□ 0.7
SMPDL3A-202ENST00000487215 RAET1GQ6H3X3 334 aa19.4■□□□□ 0.7
SMPDL3A-202ENST00000487215 CBARPQ8N350 705 aaPredicted RBP19.4■□□□□ 0.7
SMPDL3A-202ENST00000487215 ARFGAP1Q8N6T3 406 aa19.4■□□□□ 0.7
SMPDL3A-202ENST00000487215 PDCD6IPQ8WUM4 868 aaKnown RBP19.4■□□□□ 0.7
SMPDL3A-202ENST00000487215 ASPSCR1Q9BZE9 553 aa19.4■□□□□ 0.7
SMPDL3A-202ENST00000487215 KCNK4Q9NYG8 393 aa19.4■□□□□ 0.7
SMPDL3A-202ENST00000487215 PCSK1NQ9UHG2 260 aa19.4■□□□□ 0.7
SMPDL3A-202ENST00000487215 PLEKHM1Q9Y4G2 1056 aa19.4■□□□□ 0.7
SMPDL3A-202ENST00000487215 A0A1W2PQ67 120 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 GOLGA6CA6NDK9 693 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 GOLGA6BA6NDN3 693 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 EFCAB7A8K855 629 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 B4E171 279 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 GOLGA6DP0CG33 693 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 TEAD1P28347 426 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 TSPAN7P41732 249 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 ACTR1BP42025 376 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 ACTR1AP61163 376 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 PEX6Q13608 980 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 UBAP2LQ14157 1087 aaKnown RBP19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 DCAF12Q5T6F0 453 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 ANKS6Q68DC2 871 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 ACAD10Q6JQN1 1059 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 DOK6Q6PKX4 331 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 Q6ZVL8 140 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 FAM129CQ86XR2 697 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 NEK11Q8NG66 645 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 PCMTD1Q96MG8 357 aaPredicted RBP19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 CATSPER2Q96P56 530 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 DPYSL5Q9BPU6 564 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 NUP62CLQ9H1M0 184 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 GOLGA6AQ9NYA3 693 aa19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 ZFC3H1O60293 1989 aaKnown RBP19.39■□□□□ 0.69
SMPDL3A-202ENST00000487215 NPIPB15A6NHN6 443 aaPredicted RBP19.38■□□□□ 0.69
SMPDL3A-202ENST00000487215 CR2P20023 1033 aa19.38■□□□□ 0.69
SMPDL3A-202ENST00000487215 CASRP41180 1078 aa19.38■□□□□ 0.69
SMPDL3A-202ENST00000487215 RAB15P59190 212 aa19.38■□□□□ 0.69
SMPDL3A-202ENST00000487215 FOXK1P85037 733 aa19.38■□□□□ 0.69
SMPDL3A-202ENST00000487215 TRAF2Q12933 501 aa19.38■□□□□ 0.69
SMPDL3A-202ENST00000487215 MAMLD1Q13495 774 aa19.38■□□□□ 0.69
SMPDL3A-202ENST00000487215 ZNF235Q14590 738 aa19.38■□□□□ 0.69
SMPDL3A-202ENST00000487215 PTPRRQ15256 657 aa19.38■□□□□ 0.69
SMPDL3A-202ENST00000487215 PPP6R3Q5H9R7 873 aaPredicted RBP19.38■□□□□ 0.69
SMPDL3A-202ENST00000487215 TMEM71Q6P5X7 295 aa19.38■□□□□ 0.69
SMPDL3A-202ENST00000487215 CYP4V2Q6ZWL3 525 aaPredicted RBP19.38■□□□□ 0.69
SMPDL3A-202ENST00000487215 BMPERQ8N8U9 685 aa19.38■□□□□ 0.69
SMPDL3A-202ENST00000487215 SCARF2Q96GP6 870 aaPredicted RBP19.38■□□□□ 0.69
SMPDL3A-202ENST00000487215 SLC45A3Q96JT2 553 aa19.38■□□□□ 0.69
SMPDL3A-202ENST00000487215 ZNF599Q96NL3 588 aa19.38■□□□□ 0.69
SMPDL3A-202ENST00000487215 OR2M4Q96R27 311 aa19.38■□□□□ 0.69
SMPDL3A-202ENST00000487215 TAS2R14Q9NYV8 317 aa19.38■□□□□ 0.69
SMPDL3A-202ENST00000487215 PILRAQ9UKJ1 303 aa19.38■□□□□ 0.69
SMPDL3A-202ENST00000487215 PHTF1Q9UMS5 762 aa19.38■□□□□ 0.69
SMPDL3A-202ENST00000487215 PSMD11O00231 422 aa19.37■□□□□ 0.69
SMPDL3A-202ENST00000487215 NKX2-8O15522 239 aa19.37■□□□□ 0.69
SMPDL3A-202ENST00000487215 PEX11BO96011 259 aa19.37■□□□□ 0.69
SMPDL3A-202ENST00000487215 SOD1P00441 154 aa19.37■□□□□ 0.69
SMPDL3A-202ENST00000487215 CYP2A6P11509 494 aaPredicted RBP19.37■□□□□ 0.69
SMPDL3A-202ENST00000487215 COPB1P53618 953 aaKnown RBP19.37■□□□□ 0.69
SMPDL3A-202ENST00000487215 GPLD1P80108 840 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms