RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 CCDC154A6NI56 674 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 CPSF4O95639 269 aaKnown RBP13.23□□□□□ -0.29
HMGN1-216ENST00000486741 PKMP14618 531 aaKnown RBP13.23□□□□□ -0.29
HMGN1-216ENST00000486741 NELFEP18615 380 aaKnown RBP13.23□□□□□ -0.29
HMGN1-216ENST00000486741 LRRC74AQ0VAA2 488 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 PIK3R6Q5UE93 754 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 CACHD1Q5VU97 1274 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 KIAA0930Q6ICG6 404 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-216ENST00000486741 ZNF598Q86UK7 904 aaKnown RBP13.23□□□□□ -0.29
HMGN1-216ENST00000486741 CLYBLQ8N0X4 340 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 NKAPQ8N5F7 415 aaKnown RBP13.23□□□□□ -0.29
HMGN1-216ENST00000486741 CCT7Q99832 543 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 UNC93B1Q9H1C4 597 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 OPTCQ9UBM4 332 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 SLC7A8Q9UHI5 535 aa13.23□□□□□ -0.29
HMGN1-216ENST00000486741 TRAV19A0A0A6YYK7 116 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 HAS3O00219 553 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 HNRNPCP07910 306 aaKnown RBP eCLIP13.22□□□□□ -0.295e-6■■■□□ 18.1
HMGN1-216ENST00000486741 GSCP56915 257 aaPredicted RBP13.22□□□□□ -0.29
HMGN1-216ENST00000486741 CYP51A1Q16850 503 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 MBLAC2Q68D91 279 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 ALKAL1Q6UXT8 129 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 RP9Q8TA86 221 aaKnown RBP13.22□□□□□ -0.29
HMGN1-216ENST00000486741 FIG4Q92562 907 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 CDH22Q9UJ99 828 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 ZNF711Q9Y462 761 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 NUP205Q92621 2012 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 IQCF5A8MTL0 148 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 STX16-NPEPL1H3BU86 382 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 ALPIP09923 528 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 CTNNB1P35222 781 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 TIGD2Q4W5G0 525 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 PAQR3Q6TCH7 311 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 ZNF513Q8N8E2 541 aaPredicted RBP13.22□□□□□ -0.29
HMGN1-216ENST00000486741 MIEF2Q96C03 454 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 DPY30Q9C005 99 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 MAGEH1Q9H213 219 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 CD84Q9UIB8 345 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 A0A0U1RQS6 177 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 NIPSNAP2O75323 286 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 PARNO95453 639 aaKnown RBP13.22□□□□□ -0.29
HMGN1-216ENST00000486741 GALTP07902 379 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 FGF3P11487 239 aaPredicted RBP13.22□□□□□ -0.29
HMGN1-216ENST00000486741 ARHGDIAP52565 204 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 ACOX1Q15067 660 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 FIBCD1Q8N539 461 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 SIDT2Q8NBJ9 832 aaKnown RBP13.22□□□□□ -0.29
HMGN1-216ENST00000486741 KCTD14Q9BQ13 255 aaPredicted RBP13.22□□□□□ -0.29
HMGN1-216ENST00000486741 IGFLR1Q9H665 355 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 ATP13A3Q9H7F0 1226 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 MRGBPQ9NV56 204 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 OXSMQ9NWU1 459 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 SIRPGQ9P1W8 387 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 KANSL1LA0AUZ9 987 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 UGT1A6P19224 532 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 UGT1A1P22309 533 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 UGT1A4P22310 534 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 UGT1A3P35503 534 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 UGT1A5P35504 534 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 CDH4P55283 916 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 GPR17Q13304 367 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 CLLU1OSQ5K130 101 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 SCD5Q86SK9 330 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 DHDDSQ86SQ9 333 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 SLC44A2Q8IWA5 706 aaPredicted RBP13.22□□□□□ -0.29
HMGN1-216ENST00000486741 BRSK1Q8TDC3 778 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 RNF145Q96MT1 663 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 KATNBL1Q9H079 304 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 ZFYVE1Q9HBF4 777 aa13.22□□□□□ -0.29
HMGN1-216ENST00000486741 A0A1W2PRU2 124 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 AURKAO14965 403 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 MAFKO60675 156 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 TBX10O75333 385 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 FAM163BP0C2L3 166 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 MSH3P20585 1137 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 GKP32189 559 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 NRG1Q02297 640 aaPredicted RBP13.21□□□□□ -0.29
HMGN1-216ENST00000486741 VPS26BQ4G0F5 336 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 MSANTD2Q6P1R3 559 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 STYXQ8WUJ0 223 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 FAM126AQ9BYI3 521 aaPredicted RBP13.21□□□□□ -0.29
HMGN1-216ENST00000486741 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.21□□□□□ -0.29
HMGN1-216ENST00000486741 GIMAP2Q9UG22 337 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 PRKAG3Q9UGI9 489 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 ARFGEF1Q9Y6D6 1849 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 PCNAP12004 261 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 COL6A2P12110 1019 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 ATP6V1B2P21281 511 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 SNRPD1P62314 119 aaKnown RBP13.21□□□□□ -0.29
HMGN1-216ENST00000486741 SYTL1Q8IYJ3 562 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 CLHC1Q8NHS4 586 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 ING5Q8WYH8 240 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 MYO19Q96H55 970 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 OLFM3Q96PB7 478 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 ASPSCR1Q9BZE9 553 aa13.21□□□□□ -0.29
HMGN1-216ENST00000486741 SMG9Q9H0W8 520 aaKnown RBP13.21□□□□□ -0.29
HMGN1-216ENST00000486741 HECAQ9UBI9 543 aaPredicted RBP13.21□□□□□ -0.29
HMGN1-216ENST00000486741 PRMT5O14744 637 aaPredicted RBP13.21□□□□□ -0.3
HMGN1-216ENST00000486741 TP73O15350 636 aa13.21□□□□□ -0.3
HMGN1-216ENST00000486741 SLC7A4O43246 635 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms