RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 MMP20O60882 483 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 C1SP09871 688 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 ZNF806P0C7X5 589 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 GM2AP17900 193 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 ADRA1DP25100 572 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 ELK3P41970 407 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 LIG3P49916 1009 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 ADPRHP54922 357 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 CCDC15Q0P6D6 951 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 ELP6Q0PNE2 266 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 SFSWAPQ12872 951 aaKnown RBP12.78□□□□□ -0.36
HDAC6-229ENST00000486665 PDIA2Q13087 525 aaKnown RBP12.78□□□□□ -0.36
HDAC6-229ENST00000486665 SEPT6Q14141 434 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 FASTKD3Q14CZ7 662 aaKnown RBP12.78□□□□□ -0.36
HDAC6-229ENST00000486665 CNGA3Q16281 694 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 DNAJC21Q5F1R6 531 aaKnown RBP12.78□□□□□ -0.36
HDAC6-229ENST00000486665 PCID2Q5JVF3 399 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 PLA2G2CQ5R387 149 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 LRRC66Q68CR7 880 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 WDR93Q6P2C0 686 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 CES3Q6UWW8 571 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 LIPIQ6XZB0 460 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 MICALCLQ6ZW33 695 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 HSD11B1LQ7Z5J1 315 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 CCDC25Q86WR0 208 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 ANKMY2Q8IV38 441 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 ABCA7Q8IZY2 2146 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 PDIK1LQ8N165 341 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 ZNF778Q96MU6 729 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 RANBP9Q96S59 729 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 GPR63Q9BZJ6 419 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 FAM129AQ9BZQ8 928 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 FOXP3Q9BZS1 431 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 IL22Q9GZX6 179 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 TRABDQ9H4I3 376 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 SAYSD1Q9NPB0 183 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.78□□□□□ -0.365e-6■■■□□ 16.8
HDAC6-229ENST00000486665 HACD3Q9P035 362 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 RAB21Q9UL25 225 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 ZFR2Q9UPR6 939 aaKnown RBP12.78□□□□□ -0.36
HDAC6-229ENST00000486665 TCAF1Q9Y4C2 921 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 TEX264Q9Y6I9 313 aa12.78□□□□□ -0.36
HDAC6-229ENST00000486665 ZZEF1O43149 2961 aa12.77□□□□□ -0.36
HDAC6-229ENST00000486665 IGHV1OR15-9A0A0B4J2B8 117 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 C1orf232A0A0U1RR37 186 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 MROH6A6NGR9 719 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 FAM47DPA6NHR8 397 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 NEMP1O14524 444 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 TSPAN6O43657 245 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 RNGTTO60942 597 aaKnown RBP12.77□□□□□ -0.37
HDAC6-229ENST00000486665 PCDH8O95206 1070 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 SLC4A1P02730 911 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 NMBRP28336 390 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 PMLP29590 882 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 STC1P52823 247 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 LIMK1P53667 647 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 TAF1AQ15573 450 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-229ENST00000486665 STPG1Q5TH74 334 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 SEL1L3Q68CR1 1132 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 ESRP1Q6NXG1 681 aaKnown RBP12.77□□□□□ -0.37
HDAC6-229ENST00000486665 CENPUQ71F23 418 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 GLT6D1Q7Z4J2 308 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 EIF1ADQ8N9N8 165 aaKnown RBP12.77□□□□□ -0.37
HDAC6-229ENST00000486665 TOE1Q96GM8 510 aaKnown RBP12.77□□□□□ -0.37
HDAC6-229ENST00000486665 FCRL3Q96P31 734 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-229ENST00000486665 SRPK1Q96SB4 655 aaKnown RBP12.77□□□□□ -0.37
HDAC6-229ENST00000486665 FMO2Q99518 471 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 EBNA1BP2Q99848 306 aaKnown RBP12.77□□□□□ -0.37
HDAC6-229ENST00000486665 KIFC1Q9BW19 673 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 BTBD1Q9H0C5 482 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 DUSP15Q9H1R2 295 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-229ENST00000486665 ZFYVE1Q9HBF4 777 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 PLAC1Q9HBJ0 212 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 SGK2Q9HBY8 427 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 BPIFA1Q9NP55 256 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 WSB2Q9NYS7 404 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-229ENST00000486665 IL17CQ9P0M4 197 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 MTRF1LQ9UGC7 380 aaKnown RBP12.77□□□□□ -0.37
HDAC6-229ENST00000486665 SLC2A6Q9UGQ3 507 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 MBD1Q9UIS9 605 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-229ENST00000486665 RALYQ9UKM9 306 aaKnown RBP12.77□□□□□ -0.37
HDAC6-229ENST00000486665 SOX13Q9UN79 622 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 COQ6Q9Y2Z9 468 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 MAD1L1Q9Y6D9 718 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 AKAP13Q12802 2813 aa12.77□□□□□ -0.37
HDAC6-229ENST00000486665 TBC1D3DA0A087WVF3 549 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 TBC1D3IA0A087WXS9 549 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 TBC1D3EA0A087X179 549 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 TBC1D3KA0A087X1G2 549 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 A0A1W2PQU0 124 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 TBC1D3FA6NER0 549 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-229ENST00000486665 IGLON5A6NGN9 336 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 C10orf142B7Z368 130 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 TBC1D3LB9A6J9 549 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 CCL22O00626 93 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 EIF3HO15372 352 aaKnown RBP eCLIP12.76□□□□□ -0.373e-6■□□□□ 11
HDAC6-229ENST00000486665 ZNF217O75362 1048 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 CRTAMO95727 393 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 TBC1D3HP0C7X1 549 aa12.76□□□□□ -0.37
HDAC6-229ENST00000486665 LPOP22079 712 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms