RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 TMEM202A6NGA9 273 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 TNFRSF10CO14798 259 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 YY2O15391 372 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 OPA1O60313 960 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 FZD6O60353 706 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 ZRANB2O95218 330 aaKnown RBP eCLIP12.87□□□□□ -0.35
CHMP3-208ENST00000486404 SLC4A1P02730 911 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 PYGLP06737 847 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 HOXC4P09017 264 aaPredicted RBP12.87□□□□□ -0.35
CHMP3-208ENST00000486404 GPR1P46091 355 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 MARCKSL1P49006 195 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 NR2C2P49116 596 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 CDK3Q00526 305 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 LLGL1Q15334 1064 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 PCSK7Q16549 785 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 DOK6Q6PKX4 331 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 LVRNQ6Q4G3 990 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 TAF8Q7Z7C8 310 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 GAS2L3Q86XJ1 694 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 PROSER1Q86XN7 944 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 SLC35F3Q8IY50 421 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 SDR16C5Q8N3Y7 309 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 TFB1MQ8WVM0 346 aaKnown RBP12.87□□□□□ -0.35
CHMP3-208ENST00000486404 P3H4Q92791 437 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 HAUS1Q96CS2 278 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 RBM15Q96T37 977 aaKnown RBP eCLIP12.87□□□□□ -0.35
CHMP3-208ENST00000486404 BAG1Q99933 345 aaPredicted RBP12.87□□□□□ -0.35
CHMP3-208ENST00000486404 CLPBQ9H078 707 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 CARS2Q9HA77 564 aaKnown RBP12.87□□□□□ -0.35
CHMP3-208ENST00000486404 CYP4F12Q9HCS2 524 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 MRPL40Q9NQ50 206 aaKnown RBP12.87□□□□□ -0.35
CHMP3-208ENST00000486404 PPIL1Q9Y3C6 166 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 AK5Q9Y6K8 562 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 U3KQA8 63 aa12.87□□□□□ -0.35
CHMP3-208ENST00000486404 KNTC1P50748 2209 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 ASPMQ8IZT6 3477 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 hCG_1818297A0A087WSY0 165 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 SRRM3A6NNA2 597 aaPredicted RBP12.86□□□□□ -0.35
CHMP3-208ENST00000486404 B4DGG1 531 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 MTSS1O43312 755 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 KRT37O76014 449 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 MT-CO3P00414 261 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 PTMAP06454 111 aaKnown RBP12.86□□□□□ -0.35
CHMP3-208ENST00000486404 PECAM1P16284 738 aaPredicted RBP12.86□□□□□ -0.35
CHMP3-208ENST00000486404 TRIM23P36406 574 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 VAV2P52735 878 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 SKOR1P84550 965 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 CYP4F3Q08477 520 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 ILF3Q12906 894 aaKnown RBP eCLIP12.86□□□□□ -0.355e-7■■■■□ 23.6
CHMP3-208ENST00000486404 GALNT3Q14435 633 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 PRKD1Q15139 912 aaPredicted RBP12.86□□□□□ -0.35
CHMP3-208ENST00000486404 PTPRRQ15256 657 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 CRTC1Q6UUV9 634 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 B4GALNT4Q76KP1 1039 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 NT5DC3Q86UY8 548 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 RCOR2Q8IZ40 523 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 PELI3Q8N2H9 469 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 PIP4P2Q8N4L2 257 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 DCBLD1Q8N8Z6 715 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 SPC24Q8NBT2 197 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 ACRBPQ8NEB7 543 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 EXD1Q8NHP7 514 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 CCHCR1Q8TD31 782 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 SMIM14Q96QK8 99 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 LGR4Q9BXB1 951 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 TEX101Q9BY14 249 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 PKD2L2Q9NZM6 624 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 KLHL8Q9P2G9 620 aaPredicted RBP12.86□□□□□ -0.35
CHMP3-208ENST00000486404 PADI4Q9UM07 663 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 ASXL3Q9C0F0 2248 aa12.86□□□□□ -0.35
CHMP3-208ENST00000486404 ARHGEF17Q96PE2 2063 aaPredicted RBP12.85□□□□□ -0.35
CHMP3-208ENST00000486404 APC2O95996 2303 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 COL27A1Q8IZC6 1860 aaPredicted RBP12.85□□□□□ -0.35
CHMP3-208ENST00000486404 A0A0U1RQS6 177 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 EME2A4GXA9 379 aaPredicted RBP12.85□□□□□ -0.35
CHMP3-208ENST00000486404 CSO75390 466 aaKnown RBP12.85□□□□□ -0.35
CHMP3-208ENST00000486404 MMP2P08253 660 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 FECHP22830 423 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 CTNNA2P26232 953 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 TEAD1P28347 426 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 CDC25BP30305 580 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 CTNNA1P35221 906 aaKnown RBP12.85□□□□□ -0.35
CHMP3-208ENST00000486404 CETN2P41208 172 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 GNPDA1P46926 289 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 STC1P52823 247 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 DPTQ07507 201 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 CAMK2BQ13554 666 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 PPP2R5EQ16537 467 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 TAZQ16635 292 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 KCTD16Q68DU8 428 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 CCDC70Q6NSX1 233 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 RAD9BQ6WBX8 426 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 RBM44Q6ZP01 1051 aaKnown RBP12.85□□□□□ -0.35
CHMP3-208ENST00000486404 NYAP1Q6ZVC0 841 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 ZNF765Q7L2R6 523 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 KDELC2Q7Z4H8 507 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 ZC3H18Q86VM9 953 aaKnown RBP12.85□□□□□ -0.35
CHMP3-208ENST00000486404 NRSN1Q8IZ57 195 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 CNTD1Q8N815 330 aa12.85□□□□□ -0.35
CHMP3-208ENST00000486404 WDR48Q8TAF3 677 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms