RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 IL4RP24394 825 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 SLC5A2P31639 672 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 CFHR1Q03591 330 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 ITKQ08881 620 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 ILF3Q12906 894 aaKnown RBP eCLIP17.13■□□□□ 0.33
SMC4-216ENST00000485645 CLN3Q13286 438 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 HADHQ16836 314 aaKnown RBP17.13■□□□□ 0.33
SMC4-216ENST00000485645 ZSCAN23Q3MJ62 389 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 CCDC122Q5T0U0 273 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 RAET1GQ6H3X3 334 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 ALKBH5Q6P6C2 394 aaKnown RBP17.13■□□□□ 0.33
SMC4-216ENST00000485645 INO80CQ6PI98 192 aaPredicted RBP17.13■□□□□ 0.33
SMC4-216ENST00000485645 CCDC81Q6ZN84 652 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 Q6ZVL8 140 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 LUZP1Q86V48 1076 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 ZNF843Q8N446 348 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 TEX26Q8N6G2 289 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 IQCDQ96DY2 449 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 MCCC1Q96RQ3 725 aaPredicted RBP17.13■□□□□ 0.33
SMC4-216ENST00000485645 GSDMCQ9BYG8 508 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 SPATS2LQ9NUQ6 558 aaKnown RBP17.13■□□□□ 0.33
SMC4-216ENST00000485645 TRNAU1APQ9NX07 287 aaKnown RBP17.13■□□□□ 0.33
SMC4-216ENST00000485645 GOLGA6AQ9NYA3 693 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 CAPN11Q9UMQ6 739 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 PPIL1Q9Y3C6 166 aa17.13■□□□□ 0.33
SMC4-216ENST00000485645 ATMQ13315 3056 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 CAPN8A6NHC0 703 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 FUCA1P04066 466 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 HGFP14210 728 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 CTPS1P17812 591 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 TEAD1P28347 426 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 GNPDA1P46926 289 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 CDK3Q00526 305 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 ZFP36L1Q07352 338 aaKnown RBP17.12■□□□□ 0.33
SMC4-216ENST00000485645 MMRN1Q13201 1228 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 PTPRRQ15256 657 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 TSPAN33Q86UF1 283 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 NRROSQ86YC3 692 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 FAM71BQ8TC56 605 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 ZDHHC1Q8WTX9 485 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 PIH1D2Q8WWB5 315 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 TMEM159Q96B96 161 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 SEMA3CQ99985 751 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 FRMD8Q9BZ67 464 aaPredicted RBP17.12■□□□□ 0.33
SMC4-216ENST00000485645 POLR1EQ9GZS1 481 aaKnown RBP17.12■□□□□ 0.33
SMC4-216ENST00000485645 WDR70Q9NW82 654 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 PISDQ9UG56 409 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 SUFUQ9UMX1 484 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 LUC7L2Q9Y383 392 aaKnown RBP17.12■□□□□ 0.33
SMC4-216ENST00000485645 LOXL2Q9Y4K0 774 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 AHCTF1Q8WYP5 2266 aa17.12■□□□□ 0.33
SMC4-216ENST00000485645 SYCE3A1L190 88 aa17.11■□□□□ 0.33
SMC4-216ENST00000485645 ZW10O43264 779 aa17.11■□□□□ 0.33
SMC4-216ENST00000485645 PDHA1P08559 390 aa17.11■□□□□ 0.33
SMC4-216ENST00000485645 CD48P09326 243 aa17.11■□□□□ 0.33
SMC4-216ENST00000485645 GARSP41250 739 aaKnown RBP17.11■□□□□ 0.33
SMC4-216ENST00000485645 GPR1P46091 355 aa17.11■□□□□ 0.33
SMC4-216ENST00000485645 MAZP56270 477 aaKnown RBP17.11■□□□□ 0.33
SMC4-216ENST00000485645 DPTQ07507 201 aa17.11■□□□□ 0.33
SMC4-216ENST00000485645 TECPR1Q7Z6L1 1165 aa17.11■□□□□ 0.33
SMC4-216ENST00000485645 ZNF605Q86T29 641 aa17.11■□□□□ 0.33
SMC4-216ENST00000485645 CCNL2Q96S94 520 aaPredicted RBP17.11■□□□□ 0.33
SMC4-216ENST00000485645 CMKLR1Q99788 373 aa17.11■□□□□ 0.33
SMC4-216ENST00000485645 TAAR2Q9P1P5 351 aa17.11■□□□□ 0.33
SMC4-216ENST00000485645 HELZ2Q9BYK8 2649 aaKnown RBP17.1■□□□□ 0.33
SMC4-216ENST00000485645 RHPN2P1A8MT19 583 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 GOLGA6L19H0YKK7 550 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 AGRPO00253 132 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 NVLO15381 856 aaKnown RBP17.1■□□□□ 0.33
SMC4-216ENST00000485645 MFSD11O43934 449 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 FZD6O60353 706 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 FGF1P05230 155 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 CES1P23141 567 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 AK4P27144 223 aaPredicted RBP17.1■□□□□ 0.33
SMC4-216ENST00000485645 GJC1P36383 396 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 ARSEP51690 589 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 EPHB1P54762 984 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 B4GALNT1Q00973 533 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 GALNT2Q10471 571 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 BIRC2Q13490 618 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 PEX6Q13608 980 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 DPYSL3Q14195 570 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 PAFAH1B3Q15102 231 aaKnown RBP17.1■□□□□ 0.33
SMC4-216ENST00000485645 MAP9Q49MG5 647 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 ATP13A4Q4VNC1 1196 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 LRRC66Q68CR7 880 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 NCBP2-AS2Q69YL0 99 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 TIGD7Q6NT04 549 aaPredicted RBP17.1■□□□□ 0.33
SMC4-216ENST00000485645 PIM3Q86V86 326 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 C17orf82Q86X59 251 aaPredicted RBP17.1■□□□□ 0.33
SMC4-216ENST00000485645 KCTD6Q8NC69 237 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 ZNF564Q8TBZ8 553 aaPredicted RBP17.1■□□□□ 0.33
SMC4-216ENST00000485645 TTC9Q92623 222 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 AP2M1Q96CW1 435 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 HAUS2Q9NVX0 235 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 ACSL6Q9UKU0 697 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 SLC17A4Q9Y2C5 497 aa17.1■□□□□ 0.33
SMC4-216ENST00000485645 A0A0J9YYE9 177 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 A0A0U1RQS6 177 aa17.09■□□□□ 0.33
SMC4-216ENST00000485645 MATN3O15232 486 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms