RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 UBP1Q9NZI7 540 aa17.76■□□□□ 0.43
SREBF1-213ENST00000485080 DRG1Q9Y295 367 aaKnown RBP17.76■□□□□ 0.43
SREBF1-213ENST00000485080 C1orf232A0A0U1RR37 186 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 PDE2AO00408 941 aaPredicted RBP17.75■□□□□ 0.43
SREBF1-213ENST00000485080 CES2O00748 559 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 TNFRSF10CO14798 259 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 CLDN7O95471 211 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 FGGP02679 453 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 PCCBP05166 539 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 FGF1P05230 155 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 ITGAVP06756 1048 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 HTR1BP28222 390 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 TNNT3P45378 269 aaPredicted RBP17.75■□□□□ 0.43
SREBF1-213ENST00000485080 SPINT3P49223 89 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 EIF2B5Q13144 721 aaKnown RBP17.75■□□□□ 0.43
SREBF1-213ENST00000485080 SLC1A5Q15758 541 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 SIRPB2Q5JXA9 342 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 KDM7AQ6ZMT4 941 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 TMC3Q7Z5M5 1100 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 SLC35F6Q8N357 371 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 BTN2A2Q8WVV5 523 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 ATG4AQ8WYN0 398 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 FUBP1Q96AE4 644 aaKnown RBP17.75■□□□□ 0.43
SREBF1-213ENST00000485080 CDC6Q99741 560 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 TEX101Q9BY14 249 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 ABCG8Q9H221 673 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 ZFYVE1Q9HBF4 777 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 HACD3Q9P035 362 aa17.75■□□□□ 0.43
SREBF1-213ENST00000485080 K7ESM1 405 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 CACNB4O00305 520 aaPredicted RBP17.74■□□□□ 0.43
SREBF1-213ENST00000485080 ENC1O14682 589 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 CEP104O60308 925 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 PIAS2O75928 621 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 KELP23276 732 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 PSMB4P28070 264 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 BLKP51451 505 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 DCDC1P59894 354 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 KCTD11Q693B1 232 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 ADAMTSL4Q6UY14 1074 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 ARHGEF18Q6ZSZ5 1173 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 KDELC2Q7Z4H8 507 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 PELI3Q8N2H9 469 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 DEFB124Q8NES8 71 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 IPMKQ8NFU5 416 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 AP2M1Q96CW1 435 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 EID2BQ96D98 161 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 WDR26Q9H7D7 661 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 ARNT2Q9HBZ2 717 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 RAD18Q9NS91 495 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 PKD2L2Q9NZM6 624 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 FEZ2Q9UHY8 353 aaPredicted RBP17.74■□□□□ 0.43
SREBF1-213ENST00000485080 KLF15Q9UIH9 416 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 PYCARDQ9ULZ3 195 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 OR1A2Q9Y585 309 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 CSNK1G3Q9Y6M4 447 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 DGKBQ9Y6T7 804 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 TDRD6O60522 2096 aaKnown RBP17.74■□□□□ 0.43
SREBF1-213ENST00000485080 SPEGQ15772 3267 aa17.74■□□□□ 0.43
SREBF1-213ENST00000485080 CEP295Q9C0D2 2601 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 COL5A1P20908 1838 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-213ENST00000485080 A0A0U1RQS6 177 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 GOLGA6CA6NDK9 693 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 GOLGA6BA6NDN3 693 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 H3BM21 787 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 SOD1P00441 154 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 GOLGA6DP0CG33 693 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 MYCLP1P12525 358 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-213ENST00000485080 DGKAP23743 735 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 CXCR5P32302 372 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 HMGCLP35914 325 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 NOVA1P51513 510 aaKnown RBP17.73■□□□□ 0.43
SREBF1-213ENST00000485080 GDF10P55107 478 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 IL9RQ01113 521 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 BNIP3Q12983 259 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 PPM1JQ5JR12 505 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 DENND2CQ68D51 928 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 RFLNAQ6ZTI6 216 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 LYSMD3Q7Z3D4 306 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 SLC25A45Q8N413 288 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 DTX3LQ8TDB6 740 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 RHBDD1Q8TEB9 315 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 SETD7Q8WTS6 366 aaKnown RBP17.73■□□□□ 0.43
SREBF1-213ENST00000485080 C1orf54Q8WWF1 131 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 WDR92Q96MX6 357 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 C19orf43Q9BQ61 176 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 FSD1LQ9BXM9 530 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 PHPT1Q9NRX4 125 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-213ENST00000485080 DNAJC28Q9NX36 388 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 GOLGA6AQ9NYA3 693 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 ZNF148Q9UQR1 794 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 BTBD3Q9Y2F9 522 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 ZNF711Q9Y462 761 aa17.73■□□□□ 0.43
SREBF1-213ENST00000485080 USP27XA6NNY8 438 aa17.72■□□□□ 0.43
SREBF1-213ENST00000485080 PSMD3O43242 534 aa17.72■□□□□ 0.43
SREBF1-213ENST00000485080 METTL18O95568 372 aa17.72■□□□□ 0.43
SREBF1-213ENST00000485080 ATP1A1P05023 1023 aaKnown RBP17.72■□□□□ 0.43
SREBF1-213ENST00000485080 JUNDP17535 347 aa17.72■□□□□ 0.43
SREBF1-213ENST00000485080 PPARDQ03181 441 aa17.72■□□□□ 0.43
SREBF1-213ENST00000485080 LONRF2Q1L5Z9 754 aa17.72■□□□□ 0.43
SREBF1-213ENST00000485080 HENMT1Q5T8I9 393 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms