RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 PAPLNO95428 1278 aa16.69■□□□□ 0.26
CTSA-207ENST00000484855 LTA4HP09960 611 aaKnown RBP16.69■□□□□ 0.26
CTSA-207ENST00000484855 CCDC166P0CW27 439 aa16.69■□□□□ 0.26
CTSA-207ENST00000484855 BMP1P13497 986 aa16.69■□□□□ 0.26
CTSA-207ENST00000484855 WEE1P30291 646 aa16.69■□□□□ 0.26
CTSA-207ENST00000484855 HMGCLP35914 325 aa16.69■□□□□ 0.26
CTSA-207ENST00000484855 PEX6Q13608 980 aa16.69■□□□□ 0.26
CTSA-207ENST00000484855 DHCR24Q15392 516 aa16.69■□□□□ 0.26
CTSA-207ENST00000484855 MYLK3Q32MK0 819 aa16.69■□□□□ 0.26
CTSA-207ENST00000484855 ZRANB3Q5FWF4 1079 aa16.69■□□□□ 0.26
CTSA-207ENST00000484855 LIPMQ5VYY2 423 aa16.69■□□□□ 0.26
CTSA-207ENST00000484855 KLC3Q6P597 504 aa16.69■□□□□ 0.26
CTSA-207ENST00000484855 PIM3Q86V86 326 aa16.69■□□□□ 0.26
CTSA-207ENST00000484855 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.69■□□□□ 0.26
CTSA-207ENST00000484855 OR6Y1Q8NGX8 325 aa16.69■□□□□ 0.26
CTSA-207ENST00000484855 OSCP1Q8WVF1 389 aa16.69■□□□□ 0.26
CTSA-207ENST00000484855 TCF12Q99081 682 aa16.69■□□□□ 0.26
CTSA-207ENST00000484855 MRPL57Q9BQC6 102 aaKnown RBP16.69■□□□□ 0.26
CTSA-207ENST00000484855 AARSD1Q9BTE6 412 aaKnown RBP16.69■□□□□ 0.26
CTSA-207ENST00000484855 DNAJC16Q9Y2G8 782 aa16.69■□□□□ 0.26
CTSA-207ENST00000484855 CEP290O15078 2479 aa16.69■□□□□ 0.26
CTSA-207ENST00000484855 C1orf232A0A0U1RR37 186 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 TARM1B6A8C7 271 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 PFDN6O15212 129 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 CYP17A1P05093 508 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 POLR2EP19388 210 aaKnown RBP16.68■□□□□ 0.26
CTSA-207ENST00000484855 VIPR2P41587 438 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 CCNHP51946 323 aaPredicted RBP16.68■□□□□ 0.26
CTSA-207ENST00000484855 ACTN3Q08043 901 aaPredicted RBP16.68■□□□□ 0.26
CTSA-207ENST00000484855 CARD16Q5EG05 197 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 RARS2Q5T160 578 aaKnown RBP16.68■□□□□ 0.26
CTSA-207ENST00000484855 PSAPL1Q6NUJ1 521 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 KIAA0907Q7Z7F0 614 aaPredicted RBP16.68■□□□□ 0.26
CTSA-207ENST00000484855 LPGAT1Q92604 370 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 RSPRY1Q96DX4 576 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 CCDC68Q9H2F9 335 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 ZDHHC6Q9H6R6 413 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 KCNK4Q9NYG8 393 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 SLCO3A1Q9UIG8 710 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 VPS9D1Q9Y2B5 631 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.68■□□□□ 0.26
CTSA-207ENST00000484855 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.68■□□□□ 0.26
CTSA-207ENST00000484855 CAPN8A6NHC0 703 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 EPOPA6NHQ4 379 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 TMEM114B3SHH9 223 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 TRIM24O15164 1050 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 WISP3O95389 354 aaPredicted RBP16.68■□□□□ 0.26
CTSA-207ENST00000484855 ADH5P11766 374 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 FSHRP23945 695 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 TTPAP49638 278 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 CDKN1CP49918 316 aaPredicted RBP16.68■□□□□ 0.26
CTSA-207ENST00000484855 PRKAA2P54646 552 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 RAD51Q06609 339 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 KCNC3Q14003 757 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 AARS2Q5JTZ9 985 aaKnown RBP16.68■□□□□ 0.26
CTSA-207ENST00000484855 TRIM68Q6AZZ1 485 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 NAPRTQ6XQN6 538 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 Q6ZVU0 165 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 ZSWIM9Q86XI8 627 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 SPNS2Q8IVW8 549 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 NPAS3Q8IXF0 933 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 PIWIL2Q8TC59 973 aaKnown RBP16.68■□□□□ 0.26
CTSA-207ENST00000484855 ANKRD49Q8WVL7 239 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 EID2BQ96D98 161 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 UBXN10Q96LJ8 280 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 SORT1Q99523 831 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 CDCA3Q99618 268 aaPredicted RBP16.68■□□□□ 0.26
CTSA-207ENST00000484855 FAM96AQ9H5X1 160 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 ZFYVE1Q9HBF4 777 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 DZANK1Q9NVP4 752 aa16.68■□□□□ 0.26
CTSA-207ENST00000484855 SRP72O76094 671 aaKnown RBP16.67■□□□□ 0.26
CTSA-207ENST00000484855 FSBPO95073 299 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 SP100P23497 879 aaPredicted RBP16.67■□□□□ 0.26
CTSA-207ENST00000484855 ARRB2P32121 409 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 HNF1BP35680 557 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 SLC26A3P40879 764 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 BNIP1Q12981 228 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 RAB30Q15771 203 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 GEN1Q17RS7 908 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 EML3Q32P44 896 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 TCEAL5Q5H9L2 206 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 TECRLQ5HYJ1 363 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 TMEM215Q68D42 235 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 DPY19L3Q6ZPD9 716 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 WDR75Q8IWA0 830 aaKnown RBP16.67■□□□□ 0.26
CTSA-207ENST00000484855 PIANPQ8IYJ0 282 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 KIAA1958Q8N8K9 716 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 SIKE1Q9BRV8 207 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 GATA5Q9BWX5 397 aaPredicted RBP16.67■□□□□ 0.26
CTSA-207ENST00000484855 CPEB1Q9BZB8 566 aaKnown RBP16.67■□□□□ 0.26
CTSA-207ENST00000484855 SUV39H2Q9H5I1 410 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 IGFLR1Q9H665 355 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 POPDC3Q9HBV1 291 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 HEY2Q9UBP5 337 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 ZFP69BQ9UJL9 534 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 ERVW-1Q9UQF0 538 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 POP4O95707 220 aaKnown RBP16.67■□□□□ 0.26
CTSA-207ENST00000484855 HSPA4LO95757 839 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 ADH1CP00326 375 aa16.67■□□□□ 0.26
CTSA-207ENST00000484855 FMO4P31512 558 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms