RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 PGBD5Q8N414 524 aa11.94□□□□□ -0.5
SNRNP200-206ENST00000484372 SLC39A7Q92504 469 aa11.94□□□□□ -0.5
SNRNP200-206ENST00000484372 TMEM159Q96B96 161 aa11.94□□□□□ -0.5
SNRNP200-206ENST00000484372 DTD2Q96FN9 168 aa11.94□□□□□ -0.5
SNRNP200-206ENST00000484372 ZNF830Q96NB3 372 aaPredicted RBP11.94□□□□□ -0.5
SNRNP200-206ENST00000484372 SEMA3CQ99985 751 aa11.94□□□□□ -0.5
SNRNP200-206ENST00000484372 ZNF670Q9BS34 389 aa11.94□□□□□ -0.5
SNRNP200-206ENST00000484372 TMEM168Q9H0V1 697 aa11.94□□□□□ -0.5
SNRNP200-206ENST00000484372 MRPL40Q9NQ50 206 aaKnown RBP11.94□□□□□ -0.5
SNRNP200-206ENST00000484372 TRNAU1APQ9NX07 287 aaKnown RBP11.94□□□□□ -0.5
SNRNP200-206ENST00000484372 AKAP7Q9P0M2 348 aaPredicted RBP11.94□□□□□ -0.5
SNRNP200-206ENST00000484372 LRIT1Q9P2V4 623 aa11.94□□□□□ -0.5
SNRNP200-206ENST00000484372 IMPACTQ9P2X3 320 aa11.94□□□□□ -0.5
SNRNP200-206ENST00000484372 TTLL3Q9Y4R7 772 aa11.94□□□□□ -0.5
SNRNP200-206ENST00000484372 LRRK1Q38SD2 2015 aa11.94□□□□□ -0.5
SNRNP200-206ENST00000484372 FASNP49327 2511 aaKnown RBP11.94□□□□□ -0.5
SNRNP200-206ENST00000484372 ANKRD36A6QL64 1941 aa11.94□□□□□ -0.5
SNRNP200-206ENST00000484372 MATN3O15232 486 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 NUDT21O43809 227 aaKnown RBP11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 PROSCO94903 275 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 JMJD7P0C870 316 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 CCNB1P14635 433 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 CCNCP24863 283 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 CCKBRP32239 447 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 ETV3P41162 512 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 GARSP41250 739 aaKnown RBP11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 CDK3Q00526 305 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 DPTQ07507 201 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 GALNT2Q10471 571 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 MMRN1Q13201 1228 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 PAFAH1B3Q15102 231 aaKnown RBP11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 TAF1BQ53T94 588 aaPredicted RBP11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 ODF2Q5BJF6 829 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 ANKRD20A8PQ5CZ79 823 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 CERCAMQ5T4B2 595 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 TEX26Q8N6G2 289 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 Q8N9G6 341 aaPredicted RBP11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 TC2NQ8N9U0 490 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 FAM71BQ8TC56 605 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 BBC3Q96PG8 261 aaPredicted RBP11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 MCCC1Q96RQ3 725 aaPredicted RBP11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 LGR4Q9BXB1 951 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 TEX101Q9BY14 249 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 SUDS3Q9H7L9 328 aaPredicted RBP11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 ABHD10Q9NUJ1 306 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 RBM22Q9NW64 420 aaKnown RBP eCLIP11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 WDR70Q9NW82 654 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 PPIL1Q9Y3C6 166 aa11.93□□□□□ -0.5
SNRNP200-206ENST00000484372 IGSF10Q6WRI0 2623 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 A0A1W2PQM1 296 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 NPIPB15A6NHN6 443 aaPredicted RBP11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 RHPN2P1A8MT19 583 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 CDRT15L2A8MXV6 281 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 ERVH48-1M5A8F1 160 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 MFSD11O43934 449 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 AKR1B10O60218 316 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 CTPS1P17812 591 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 GM2AP17900 193 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 IL4RP24394 825 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 GNPDA1P46926 289 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 VAC14Q08AM6 782 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 DPYSL3Q14195 570 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 HLTFQ14527 1009 aaKnown RBP eCLIP11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 SLC18A3Q16572 532 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 ARHGAP40Q5TG30 622 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 Q6ZVL8 140 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 HSD11B1LQ7Z5J1 315 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 CLEC14AQ86T13 490 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 JAMLQ86YT9 394 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 RAVER1Q8IY67 606 aaKnown RBP11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 CCNYQ8ND76 341 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 GPBAR1Q8TDU6 330 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 ZDHHC1Q8WTX9 485 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 PIH1D2Q8WWB5 315 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 MAML1Q92585 1016 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 FATE1Q969F0 183 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 AP2M1Q96CW1 435 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 NSMCE3Q96MG7 304 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 TSGA13Q96PP4 275 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 CMKLR1Q99788 373 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 FOXP3Q9BZS1 431 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 CDH19Q9H159 772 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 RABGEF1Q9UJ41 708 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 PCDHGA7Q9Y5G6 932 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 SHROOM3Q8TF72 1996 aa11.92□□□□□ -0.5
SNRNP200-206ENST00000484372 LOC400499M0QZD8 3231 aa11.91□□□□□ -0.5
SNRNP200-206ENST00000484372 SMG1Q96Q15 3661 aaKnown RBP11.91□□□□□ -0.5
SNRNP200-206ENST00000484372 A0A0J9YYE9 177 aa11.91□□□□□ -0.5
SNRNP200-206ENST00000484372 NOBOXO60393 691 aa11.91□□□□□ -0.5
SNRNP200-206ENST00000484372 TRBC1P01850 177 aa11.91□□□□□ -0.5
SNRNP200-206ENST00000484372 CEACAM5P06731 702 aa11.91□□□□□ -0.5
SNRNP200-206ENST00000484372 IVLP07476 585 aa11.91□□□□□ -0.5
SNRNP200-206ENST00000484372 CD48P09326 243 aa11.91□□□□□ -0.5
SNRNP200-206ENST00000484372 LHCGRP22888 699 aa11.91□□□□□ -0.5
SNRNP200-206ENST00000484372 MAN1A1P33908 653 aa11.91□□□□□ -0.5
SNRNP200-206ENST00000484372 UGT1A5P35504 534 aa11.91□□□□□ -0.5
SNRNP200-206ENST00000484372 ARSEP51690 589 aa11.91□□□□□ -0.5
SNRNP200-206ENST00000484372 PDX1P52945 283 aa11.91□□□□□ -0.5
SNRNP200-206ENST00000484372 RPL26P61254 145 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms