RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 PCDH12Q9NPG4 1184 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 FAM114A2Q9NRY5 505 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 GRHL1Q9NZI5 618 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 FZD4Q9ULV1 537 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 SHOC2Q9UQ13 582 aa11.61□□□□□ -0.55
HPS4-212ENST00000481910 AP3B1O00203 1094 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 AXIN1O15169 862 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 TP73O15350 636 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 GPR37L1O60883 481 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 AVILO75366 819 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 SUOXP51687 545 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 CSTF1Q05048 431 aaKnown RBP11.6□□□□□ -0.55
HPS4-212ENST00000481910 ELP6Q0PNE2 266 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 MTM1Q13496 603 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 TMEM31Q5JXX7 168 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 IFT20Q8IY31 132 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 BLOC1S5Q8TDH9 187 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 RLN3Q8WXF3 142 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 ART4Q93070 314 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 SLC35B4Q969S0 331 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 BTBD1Q9H0C5 482 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 EPC1Q9H2F5 836 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 MAGEE1Q9HCI5 957 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 CASS4Q9NQ75 786 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 PRMT8Q9NR22 394 aaPredicted RBP11.6□□□□□ -0.55
HPS4-212ENST00000481910 USP36Q9P275 1121 aaKnown RBP11.6□□□□□ -0.55
HPS4-212ENST00000481910 CYP8B1Q9UNU6 501 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 NUMA1Q14980 2115 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 A0A0U1RQS6 177 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 CAPN8A6NHC0 703 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 NPIPB15A6NHN6 443 aaPredicted RBP11.6□□□□□ -0.55
HPS4-212ENST00000481910 PRR33A8MZF0 331 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 EIF3FO00303 357 aaPredicted RBP11.6□□□□□ -0.55
HPS4-212ENST00000481910 AREL1O15033 823 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 SLC7A4O43246 635 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 CYP2A6P11509 494 aaPredicted RBP11.6□□□□□ -0.55
HPS4-212ENST00000481910 IDO1P14902 403 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 HOXA6P31267 233 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 ACSL1P33121 698 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 SESN2P58004 480 aaPredicted RBP11.6□□□□□ -0.55
HPS4-212ENST00000481910 CAV1Q03135 178 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 HLTFQ14527 1009 aaKnown RBP eCLIP11.6□□□□□ -0.55
HPS4-212ENST00000481910 DENND2CQ68D51 928 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 ZNF534Q76KX8 674 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 CAND1Q86VP6 1230 aaKnown RBP11.6□□□□□ -0.55
HPS4-212ENST00000481910 APLFQ8IW19 511 aaPredicted RBP11.6□□□□□ -0.55
HPS4-212ENST00000481910 SAMD14Q8IZD0 417 aaPredicted RBP11.6□□□□□ -0.55
HPS4-212ENST00000481910 MAML2Q8IZL2 1156 aaPredicted RBP11.6□□□□□ -0.55
HPS4-212ENST00000481910 FBXO25Q8TCJ0 367 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 MAGEC3Q8TD91 643 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 SERPINB12Q96P63 405 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 MCCC1Q96RQ3 725 aaPredicted RBP11.6□□□□□ -0.55
HPS4-212ENST00000481910 TRIM4Q9C037 500 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 XAB2Q9HCS7 855 aaKnown RBP11.6□□□□□ -0.55
HPS4-212ENST00000481910 GDF3Q9NR23 364 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 BFARQ9NZS9 450 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 B4GALT6Q9UBX8 382 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 GGT7Q9UJ14 662 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 FADS3Q9Y5Q0 445 aa11.6□□□□□ -0.55
HPS4-212ENST00000481910 TBC1D3DA0A087WVF3 549 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 TBC1D3IA0A087WXS9 549 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 TBC1D3EA0A087X179 549 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 TBC1D3KA0A087X1G2 549 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 C1orf232A0A0U1RR37 186 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 TBC1D3FA6NER0 549 aaPredicted RBP11.59□□□□□ -0.55
HPS4-212ENST00000481910 FAM47DPA6NHR8 397 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 TBC1D3LB9A6J9 549 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 BHMG1C9JSJ3 638 aaPredicted RBP11.59□□□□□ -0.55
HPS4-212ENST00000481910 PLRG1O43660 514 aaKnown RBP11.59□□□□□ -0.55
HPS4-212ENST00000481910 PCDH8O95206 1070 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 IGLV3-19P01714 112 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 TBC1D3HP0C7X1 549 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 MLNP12872 115 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 OXTRP30559 389 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 NPY2RP49146 381 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 TAS2R38P59533 333 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 ROR2Q01974 943 aaKnown RBP11.59□□□□□ -0.55
HPS4-212ENST00000481910 DMWDQ09019 674 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 ARHGEF7Q14155 803 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 POU6F1Q14863 301 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 ERCC6LQ2NKX8 1250 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 USP39Q53GS9 565 aaKnown RBP11.59□□□□□ -0.55
HPS4-212ENST00000481910 CERCAMQ5T4B2 595 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 TBC1D3GQ6DHY5 549 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 TBC1D3CQ6IPX1 549 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 CRTC1Q6UUV9 634 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 TBC1D3Q8IZP1 549 aaPredicted RBP11.59□□□□□ -0.55
HPS4-212ENST00000481910 PDIK1LQ8N165 341 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 CHCHD4Q8N4Q1 142 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 FAM131CQ96AQ9 280 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 PPP1R14BQ96C90 147 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 PWWP2AQ96N64 755 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 LYSMD1Q96S90 227 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 SRPK1Q96SB4 655 aaKnown RBP11.59□□□□□ -0.55
HPS4-212ENST00000481910 C1QTNF1Q9BXJ1 281 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 CAPS2Q9BXY5 557 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 FRMD8Q9BZ67 464 aaPredicted RBP11.59□□□□□ -0.55
HPS4-212ENST00000481910 SGK2Q9HBY8 427 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 TMEM165Q9HC07 324 aa11.59□□□□□ -0.55
HPS4-212ENST00000481910 HACD3Q9P035 362 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms