RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-211	ENST00000481154	TMED6	Q8WW62	240 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	ARHGEF2	Q92974	986 aa	Known RBP	4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	WDFY2	Q96P53	400 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	TMEM47	Q9BQJ4	181 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	CHCHD6	Q9BRQ6	235 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	C1QTNF5	Q9BXJ0	243 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	GPR108	Q9NPR9	543 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	BLOC1S4	Q9NUP1	217 aa		4.94	□□□□□ -1.62
PTPN12-211	ENST00000481154	FAM237A	A0A1B0GTK4	181 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	LINC01553	A4QN01	128 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	NKX2-2	O95096	273 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	IPO7	O95373	1038 aa	Known RBP	4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	ACADM	P11310	421 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	FCGR1A	P12314	374 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	ZNF182	P17025	639 aa	Predicted RBP	4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	MAOA	P21397	527 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	MAPK4	P31152	587 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	EIF2S3	P41091	472 aa	Known RBP	4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	GAS1	P54826	345 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	SEC61A1	P61619	476 aa	Known RBP	4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	LMOD3	Q0VAK6	560 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	TRAF3	Q13114	568 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	MAMLD1	Q13495	774 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	PLCB4	Q15147	1175 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	C9orf57	Q5W0N0	161 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	CREB3L2	Q70SY1	520 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	C16orf82	Q7Z2V1	217 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	ARMC9	Q7Z3E5	817 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	ARHGAP12	Q8IWW6	846 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	CCDC13	Q8IYE1	715 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	HAUS8	Q9BT25	410 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	IFIH1	Q9BYX4	1025 aa	Known RBP	4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	NDST4	Q9H3R1	872 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	HINT3	Q9NQE9	182 aa	Known RBP	4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	TXLNG	Q9NUQ3	528 aa		4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	CNOT8	Q9UFF9	292 aa	Known RBP	4.93	□□□□□ -1.62
PTPN12-211	ENST00000481154	IGLV5-52	A0A0A0MRZ9	124 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154		A0A0U1RQJ8	604 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	HNRNPCL1	O60812	293 aa	Known RBP	4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	ZBED4	O75132	1171 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	MLYCD	O95822	493 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	G6PD	P11413	515 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	ZNF12	P17014	697 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	CDH2	P19022	906 aa	Predicted RBP	4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	RGS19	P49795	217 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	METAP2	P50579	478 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	RAD23B	P54727	409 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	ARF3	P61204	181 aa	Predicted RBP	4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	ARF1	P84077	181 aa	Known RBP	4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	BNC1	Q01954	994 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	NIPAL4	Q0D2K0	466 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	KIF5A	Q12840	1032 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	KRT24	Q2M2I5	525 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	EIF2S3L	Q2VIR3	472 aa	Known RBP	4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	SLC45A4	Q5BKX6	768 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	FAM69B	Q5VUD6	431 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	PQLC2	Q6ZP29	291 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	SPATA6L	Q8N4H0	392 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	USP6NL	Q92738	828 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	TMEM68	Q96MH6	324 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	KCNN2	Q9H2S1	579 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	PPP1R3E	Q9H7J1	279 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	CNGB3	Q9NQW8	809 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	OCIAD1	Q9NX40	245 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	SLC9A2	Q9UBY0	812 aa		4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	CORO1C	Q9ULV4	474 aa	Predicted RBP	4.92	□□□□□ -1.62
PTPN12-211	ENST00000481154	hDV102S1	A0JD36	115 aa		4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	CPED1	A4D0V7	1026 aa		4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	VCY	O14598	125 aa		4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	PTP4A3	O75365	173 aa		4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	FTCD	O95954	541 aa		4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	DDX5	P17844	614 aa	Known RBP	4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	STX2	P32856	288 aa		4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	PPARG	P37231	505 aa	Predicted RBP	4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	EIF5	P55010	431 aa	Known RBP	4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	COASY	Q13057	564 aa		4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	GGNBP1	Q5YKI7	109 aa		4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	METTL2B	Q6P1Q9	378 aa	Known RBP	4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	IKBIP	Q70UQ0	350 aa		4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	CUZD1	Q86UP6	607 aa		4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	DSEL	Q8IZU8	1212 aa		4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	CREB3L4	Q8TEY5	395 aa		4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	ARHGEF26	Q96DR7	871 aa		4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	RRNAD1	Q96FB5	475 aa	Known RBP	4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	METTL2A	Q96IZ6	378 aa	Known RBP	4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	PPP1R13B	Q96KQ4	1090 aa		4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	TREX2	Q9BQ50	279 aa	Predicted RBP	4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	PLEKHA5	Q9HAU0	1116 aa		4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	RANGRF	Q9HD47	186 aa	Predicted RBP	4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	EIF2B3	Q9NR50	452 aa	Known RBP	4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	RRP7BP	Q9NSQ0	103 aa		4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	TBC1D22B	Q9NU19	505 aa		4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	HCFC1R1	Q9NWW0	138 aa		4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	MDFIC	Q9P1T7	246 aa		4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	LAS1L	Q9Y4W2	734 aa	Known RBP	4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154	LYVE1	Q9Y5Y7	322 aa		4.91	□□□□□ -1.62
PTPN12-211	ENST00000481154		A0A087WYN8	130 aa		4.9	□□□□□ -1.63
PTPN12-211	ENST00000481154	SMTNL1	A8MU46	457 aa		4.9	□□□□□ -1.63
PTPN12-211	ENST00000481154	BTBD18	B2RXH4	712 aa		4.9	□□□□□ -1.63

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