RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 IFI44Q8TCB0 444 aa12.86□□□□□ -0.35
ABCF3-215ENST00000481116 PTCD2Q8WV60 388 aaKnown RBP12.86□□□□□ -0.35
ABCF3-215ENST00000481116 SCAMP4Q969E2 229 aa12.86□□□□□ -0.35
ABCF3-215ENST00000481116 AGAP2Q99490 1192 aa12.86□□□□□ -0.35
ABCF3-215ENST00000481116 ABCG8Q9H221 673 aa12.86□□□□□ -0.35
ABCF3-215ENST00000481116 WDR26Q9H7D7 661 aa12.86□□□□□ -0.35
ABCF3-215ENST00000481116 C10orf88Q9H8K7 445 aa12.86□□□□□ -0.35
ABCF3-215ENST00000481116 CYP4F12Q9HCS2 524 aa12.86□□□□□ -0.35
ABCF3-215ENST00000481116 HAUS2Q9NVX0 235 aa12.86□□□□□ -0.35
ABCF3-215ENST00000481116 UBP1Q9NZI7 540 aa12.86□□□□□ -0.35
ABCF3-215ENST00000481116 SIRPGQ9P1W8 387 aa12.86□□□□□ -0.35
ABCF3-215ENST00000481116 DOLKQ9UPQ8 538 aa12.86□□□□□ -0.35
ABCF3-215ENST00000481116 IGF2RP11717 2491 aa12.86□□□□□ -0.35
ABCF3-215ENST00000481116 CAPN8A6NHC0 703 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 LMO7DNF2Z398 122 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 PSMD11O00231 422 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 TPP1O14773 563 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 PJA2O43164 708 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 IPO7O95373 1038 aaKnown RBP12.85□□□□□ -0.35
ABCF3-215ENST00000481116 MT-CYBP00156 380 aaPredicted RBP12.85□□□□□ -0.35
ABCF3-215ENST00000481116 FUCA1P04066 466 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 PIRTP0C851 137 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 TGM2P21980 687 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 PTPN3P26045 913 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 POLD2P49005 469 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 BLKP51451 505 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 ILKQ13418 452 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 ELOCQ15369 112 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 TEX44Q53QW1 395 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 C6orf132Q5T0Z8 1188 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 EFL1Q7Z2Z2 1120 aaKnown RBP12.85□□□□□ -0.35
ABCF3-215ENST00000481116 KIAA1328Q86T90 577 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 NT5DC3Q86UY8 548 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 SFTPA2Q8IWL1 248 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 EXD1Q8NHP7 514 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 CCL4L1Q8NHW4 92 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 TFB1MQ8WVM0 346 aaKnown RBP12.85□□□□□ -0.35
ABCF3-215ENST00000481116 P3H4Q92791 437 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 IMP4Q96G21 291 aaKnown RBP12.85□□□□□ -0.35
ABCF3-215ENST00000481116 BOCQ9BWV1 1114 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 TMEM168Q9H0V1 697 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 GLOD4Q9HC38 313 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 GULP1Q9UBP9 304 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 PCDHA3Q9Y5H8 950 aa12.85□□□□□ -0.35
ABCF3-215ENST00000481116 C1orf232A0A0U1RR37 186 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 PRSS38A1L453 326 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 MACROD2A1Z1Q3 448 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 GRID2IPA4D2P6 1211 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 TMEM8BA6NDV4 472 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 BTNL10A8MVZ5 291 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 ANKRD66B4E2M5 251 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 OPA1O60313 960 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 SOD1P00441 154 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 HOXC4P09017 264 aaPredicted RBP12.84□□□□□ -0.35
ABCF3-215ENST00000481116 CDK4P11802 303 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 MYCLP1P12525 358 aaPredicted RBP12.84□□□□□ -0.35
ABCF3-215ENST00000481116 CA4P22748 312 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 CD68P34810 354 aaPredicted RBP12.84□□□□□ -0.35
ABCF3-215ENST00000481116 CTNNA1P35221 906 aaKnown RBP12.84□□□□□ -0.35
ABCF3-215ENST00000481116 GPR1P46091 355 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 NR2C2P49116 596 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 DUSP3P51452 185 aaPredicted RBP12.84□□□□□ -0.35
ABCF3-215ENST00000481116 STC1P52823 247 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 CDK3Q00526 305 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 CYP4F3Q08477 520 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 WASHC5Q12768 1159 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 NR0B2Q15466 257 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 DOK6Q6PKX4 331 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 TRIM74Q86UV6 250 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 FSTL5Q8N475 847 aaPredicted RBP12.84□□□□□ -0.35
ABCF3-215ENST00000481116 KYQ8NBH2 561 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 ATL2Q8NHH9 583 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 KIAA1524Q8TCG1 905 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 AP2M1Q96CW1 435 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 RBM41Q96IZ5 413 aaKnown RBP12.84□□□□□ -0.35
ABCF3-215ENST00000481116 TBATAQ96M53 351 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 TRIB3Q96RU7 358 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 WDR24Q96S15 920 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 FAM118BQ9BPY3 351 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 MLPHQ9BV36 600 aaPredicted RBP12.84□□□□□ -0.35
ABCF3-215ENST00000481116 RIOK2Q9BVS4 552 aaKnown RBP12.84□□□□□ -0.35
ABCF3-215ENST00000481116 TEX101Q9BY14 249 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 SLC25A51Q9H1U9 297 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 CCDC86Q9H6F5 360 aaKnown RBP12.84□□□□□ -0.35
ABCF3-215ENST00000481116 PHPT1Q9NRX4 125 aaPredicted RBP12.84□□□□□ -0.35
ABCF3-215ENST00000481116 IMPACTQ9P2X3 320 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 PACSIN2Q9UNF0 486 aaPredicted RBP12.84□□□□□ -0.35
ABCF3-215ENST00000481116 GPR34Q9UPC5 381 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 TMEM98Q9Y2Y6 226 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.84□□□□□ -0.35
ABCF3-215ENST00000481116 DGKBQ9Y6T7 804 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 EPG5Q9HCE0 2579 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 DMXL2Q8TDJ6 3036 aa12.84□□□□□ -0.35
ABCF3-215ENST00000481116 EME2A4GXA9 379 aaPredicted RBP12.83□□□□□ -0.36
ABCF3-215ENST00000481116 SRRM3A6NNA2 597 aaPredicted RBP12.83□□□□□ -0.36
ABCF3-215ENST00000481116 INPP4BO15327 924 aa12.83□□□□□ -0.36
ABCF3-215ENST00000481116 PMPCBO75439 489 aa12.83□□□□□ -0.36
ABCF3-215ENST00000481116 MT-CO3P00414 261 aa12.83□□□□□ -0.36
ABCF3-215ENST00000481116 CEACAM5P06731 702 aa12.83□□□□□ -0.36
ABCF3-215ENST00000481116 ZNF30P17039 623 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms