RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 TMCC1O94876 653 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 UGT2B4P06133 528 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 MYBL1P10243 752 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 LIPCP11150 499 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 ITIH2P19823 946 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 NFKBIAP25963 317 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 FNTAP49354 379 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 ARSDP51689 593 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 ZNF135P52742 658 aaPredicted RBP6.69□□□□□ -1.34
VCP-205ENST00000479300 HDAC4P56524 1084 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 ELP6Q0PNE2 266 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 PTP4A2Q12974 167 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 TBX2Q13207 712 aaPredicted RBP6.69□□□□□ -1.34
VCP-205ENST00000479300 SPIDRQ14159 915 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 NCAPHQ15003 741 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 SKIDA1Q1XH10 827 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 INO80DQ53TQ3 878 aaPredicted RBP6.69□□□□□ -1.34
VCP-205ENST00000479300 TDRD12Q587J7 1177 aaKnown RBP6.69□□□□□ -1.34
VCP-205ENST00000479300 LRRC73Q5JTD7 316 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 FAM72AQ5TYM5 149 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 MANEALQ5VSG8 457 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 DMRTA1Q5VZB9 504 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 FAM72DQ6L9T8 149 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 ERAP2Q6P179 960 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 XKR5Q6UX68 686 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 MICALCLQ6ZW33 695 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 MON1BQ7L1V2 547 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 NLRP14Q86W24 1093 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 FAM72BQ86X60 149 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 PTRH1Q86Y79 214 aaKnown RBP6.69□□□□□ -1.34
VCP-205ENST00000479300 JAMLQ86YT9 394 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 PHACTR4Q8IZ21 702 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 BBS5Q8N3I7 341 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 SDR16C5Q8N3Y7 309 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 OR6K2Q8NGY2 324 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 ATL2Q8NHH9 583 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 FAM76AQ8TAV0 307 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 NSMCE1Q8WV22 266 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 NAT6Q93015 286 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 PMEPA1Q969W9 287 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 CENPTQ96BT3 561 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 ZNF653Q96CK0 615 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 KLHL32Q96NJ5 620 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 LENG8Q96PV6 779 aaPredicted RBP6.69□□□□□ -1.34
VCP-205ENST00000479300 PSMG3-AS1Q96PY0 264 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 WDR24Q96S15 920 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 EDEM3Q9BZQ6 932 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 TTYH3Q9C0H2 523 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 DHX35Q9H5Z1 703 aaKnown RBP6.69□□□□□ -1.34
VCP-205ENST00000479300 SYNDIG1Q9H7V2 258 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 SP110Q9HB58 689 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 MBNL1Q9NR56 388 aaKnown RBP6.69□□□□□ -1.34
VCP-205ENST00000479300 NCKIPSDQ9NZQ3 722 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 MYO1AQ9UBC5 1043 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 UBA2Q9UBT2 640 aaPredicted RBP6.69□□□□□ -1.34
VCP-205ENST00000479300 PISDQ9UG56 409 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 AP4E1Q9UPM8 1137 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 DOLKQ9UPQ8 538 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 MAN2B2Q9Y2E5 1009 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 BZW2Q9Y6E2 419 aaKnown RBP6.69□□□□□ -1.34
VCP-205ENST00000479300 SDK2Q58EX2 2172 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 LRRK1Q38SD2 2015 aa6.69□□□□□ -1.34
VCP-205ENST00000479300 SPTBN1Q01082 2364 aaKnown RBP6.68□□□□□ -1.34
VCP-205ENST00000479300 ANKRD17O75179 2603 aaKnown RBP6.68□□□□□ -1.34
VCP-205ENST00000479300 LRBAP50851 2863 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 A0A1W2PQC6 194 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 TTC36A6NLP5 189 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 WASH4PA8MWX3 477 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 H3BRJ5 948 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 TOR1BO14657 336 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 AREL1O15033 823 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 TEX33O43247 280 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 TM7SF2O76062 418 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 KIAA0754O94854 1291 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 SYF2O95926 243 aaKnown RBP6.68□□□□□ -1.34
VCP-205ENST00000479300 FTLP02792 175 aaPredicted RBP6.68□□□□□ -1.34
VCP-205ENST00000479300 NTRK1P04629 796 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 RPLP0P05388 317 aaKnown RBP6.68□□□□□ -1.34
VCP-205ENST00000479300 NEFHP12036 1026 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 GZMAP12544 262 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 ATP1A3P13637 1013 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 CCKBRP32239 447 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 ARL4AP40617 200 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 RPIAP49247 311 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 RENBPP51606 427 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 NDST2P52849 883 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 INHBCP55103 352 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 RPL7AP62424 266 aaKnown RBP6.68□□□□□ -1.34
VCP-205ENST00000479300 ZFP36L1Q07352 338 aaKnown RBP6.68□□□□□ -1.34
VCP-205ENST00000479300 ADCY2Q08462 1091 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 SERINC3Q13530 473 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 ALG11Q2TAA5 492 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 RAB6CQ53S08 254 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 PPP6R3Q5H9R7 873 aaPredicted RBP6.68□□□□□ -1.34
VCP-205ENST00000479300 ATXN7L2Q5T6C5 722 aaPredicted RBP6.68□□□□□ -1.34
VCP-205ENST00000479300 ERMARDQ5T6L9 678 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 FAXCQ5TGI0 409 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 TMCO4Q5TGY1 634 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 IRF2BP2Q7Z5L9 587 aa6.68□□□□□ -1.34
VCP-205ENST00000479300 DNAAF5Q86Y56 855 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms