RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 CBLBQ13191 982 aa19.91■□□□□ 0.78
ACTB-210ENST00000477812 SGCGQ13326 291 aa19.91■□□□□ 0.78
ACTB-210ENST00000477812 PTPRCAPQ14761 206 aa19.91■□□□□ 0.78
ACTB-210ENST00000477812 PEAR1Q5VY43 1037 aaPredicted RBP19.91■□□□□ 0.78
ACTB-210ENST00000477812 DENND2CQ68D51 928 aa19.91■□□□□ 0.78
ACTB-210ENST00000477812 PRR23BQ6ZRT6 265 aa19.91■□□□□ 0.78
ACTB-210ENST00000477812 ZNF765Q7L2R6 523 aa19.91■□□□□ 0.78
ACTB-210ENST00000477812 NRSN1Q8IZ57 195 aa19.91■□□□□ 0.78
ACTB-210ENST00000477812 SUMF1Q8NBK3 374 aa19.91■□□□□ 0.78
ACTB-210ENST00000477812 ART4Q93070 314 aa19.91■□□□□ 0.78
ACTB-210ENST00000477812 PWWP2AQ96N64 755 aa19.91■□□□□ 0.78
ACTB-210ENST00000477812 C19orf43Q9BQ61 176 aa19.91■□□□□ 0.78
ACTB-210ENST00000477812 IL22Q9GZX6 179 aa19.91■□□□□ 0.78
ACTB-210ENST00000477812 FZD3Q9NPG1 666 aa19.91■□□□□ 0.78
ACTB-210ENST00000477812 RRAGDQ9NQL2 400 aaPredicted RBP19.91■□□□□ 0.78
ACTB-210ENST00000477812 SYBUQ9NX95 663 aa19.91■□□□□ 0.78
ACTB-210ENST00000477812 EIF2B4Q9UI10 523 aaKnown RBP19.91■□□□□ 0.78
ACTB-210ENST00000477812 TCAF1Q9Y4C2 921 aa19.91■□□□□ 0.78
ACTB-210ENST00000477812 ZNF106Q9H2Y7 1883 aaKnown RBP19.9■□□□□ 0.78
ACTB-210ENST00000477812 NDC80O14777 642 aa19.9■□□□□ 0.78
ACTB-210ENST00000477812 BUD23O43709 281 aaKnown RBP19.9■□□□□ 0.78
ACTB-210ENST00000477812 CRTAMO95727 393 aa19.9■□□□□ 0.78
ACTB-210ENST00000477812 LPOP22079 712 aaPredicted RBP19.9■□□□□ 0.78
ACTB-210ENST00000477812 MAOBP27338 520 aa19.9■□□□□ 0.78
ACTB-210ENST00000477812 IGFALSP35858 605 aa19.9■□□□□ 0.78
ACTB-210ENST00000477812 DHPSP49366 369 aaPredicted RBP19.9■□□□□ 0.78
ACTB-210ENST00000477812 DPTQ07507 201 aa19.9■□□□□ 0.78
ACTB-210ENST00000477812 IRF4Q15306 451 aa19.9■□□□□ 0.78
ACTB-210ENST00000477812 MSS51Q4VC12 460 aa19.9■□□□□ 0.78
ACTB-210ENST00000477812 CCDC38Q502W7 563 aa19.9■□□□□ 0.78
ACTB-210ENST00000477812 FNBP1LQ5T0N5 605 aa19.9■□□□□ 0.78
ACTB-210ENST00000477812 ARMC3Q5W041 872 aa19.9■□□□□ 0.78
ACTB-210ENST00000477812 PELI3Q8N2H9 469 aa19.9■□□□□ 0.78
ACTB-210ENST00000477812 MPP5Q8N3R9 675 aa19.9■□□□□ 0.78
ACTB-210ENST00000477812 SNX19Q92543 992 aa19.9■□□□□ 0.78
ACTB-210ENST00000477812 NUS1Q96E22 293 aa19.9■□□□□ 0.78
ACTB-210ENST00000477812 FRMD8Q9BZ67 464 aaPredicted RBP19.9■□□□□ 0.78
ACTB-210ENST00000477812 ABCG8Q9H221 673 aa19.9■□□□□ 0.78
ACTB-210ENST00000477812 MBNL1Q9NR56 388 aaKnown RBP19.9■□□□□ 0.78
ACTB-210ENST00000477812 ZDHHC18Q9NUE0 388 aa19.9■□□□□ 0.78
ACTB-210ENST00000477812 PKD2L2Q9NZM6 624 aa19.9■□□□□ 0.78
ACTB-210ENST00000477812 BFARQ9NZS9 450 aa19.9■□□□□ 0.78
ACTB-210ENST00000477812 PILRBQ9UKJ0 227 aa19.9■□□□□ 0.78
ACTB-210ENST00000477812 SMG5Q9UPR3 1016 aaKnown RBP19.9■□□□□ 0.78
ACTB-210ENST00000477812 HEATR9A2RTY3 570 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 GOLGA8CPA6NN73 597 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 PRAMEF26H0Y7S4 382 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 GAPDHSO14556 408 aaPredicted RBP19.89■□□□□ 0.77
ACTB-210ENST00000477812 PPFIA2O75334 1257 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 SLU7O95391 586 aaKnown RBP19.89■□□□□ 0.77
ACTB-210ENST00000477812 SOD1P00441 154 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 ADRA1DP25100 572 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 CALCOCO2Q13137 446 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 SEPT6Q14141 434 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 LRRC14Q15048 493 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 LPAL2Q16609 132 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 WDR45BQ5MNZ6 344 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 HENMT1Q5T8I9 393 aaKnown RBP19.89■□□□□ 0.77
ACTB-210ENST00000477812 ESRP1Q6NXG1 681 aaKnown RBP19.89■□□□□ 0.77
ACTB-210ENST00000477812 KDM7AQ6ZMT4 941 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 GCNT7Q6ZNI0 430 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 NLRP8Q86W28 1048 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 ZCCHC9Q8N567 271 aaKnown RBP19.89■□□□□ 0.77
ACTB-210ENST00000477812 GPR26Q8NDV2 337 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 OR4K2Q8NGD2 314 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 FBXO25Q8TCJ0 367 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 ATOH1Q92858 354 aaPredicted RBP19.89■□□□□ 0.77
ACTB-210ENST00000477812 SCAMP4Q969E2 229 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 LOXL4Q96JB6 756 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 SERAC1Q96JX3 654 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 DNAJC1Q96KC8 554 aaKnown RBP19.89■□□□□ 0.77
ACTB-210ENST00000477812 SIGLEC10Q96LC7 697 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 ZNF778Q96MU6 729 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 SLC6A18Q96N87 628 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 WDR83Q9BRX9 315 aaKnown RBP19.89■□□□□ 0.77
ACTB-210ENST00000477812 KIFC1Q9BW19 673 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 C1QTNF7Q9BXJ2 289 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 EPB41L5Q9HCM4 733 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 FAM86C1Q9NVL1 165 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 RIMKLBQ9ULI2 386 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 CA5BQ9Y2D0 317 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 HCN4Q9Y3Q4 1203 aa19.89■□□□□ 0.77
ACTB-210ENST00000477812 ATXN2Q99700 1313 aaKnown RBP19.88■□□□□ 0.77
ACTB-210ENST00000477812 C2orf81A6NN90 581 aa19.88■□□□□ 0.77
ACTB-210ENST00000477812 K7ESM1 405 aa19.88■□□□□ 0.77
ACTB-210ENST00000477812 ECHS1P30084 290 aa19.88■□□□□ 0.77
ACTB-210ENST00000477812 AKT2P31751 481 aa19.88■□□□□ 0.77
ACTB-210ENST00000477812 PDE1BQ01064 536 aa19.88■□□□□ 0.77
ACTB-210ENST00000477812 ACVR1Q04771 509 aa19.88■□□□□ 0.77
ACTB-210ENST00000477812 PCID2Q5JVF3 399 aa19.88■□□□□ 0.77
ACTB-210ENST00000477812 ABI3BPQ7Z7G0 1075 aa19.88■□□□□ 0.77
ACTB-210ENST00000477812 PLA2G15Q8NCC3 412 aa19.88■□□□□ 0.77
ACTB-210ENST00000477812 OR13C4Q8NGS5 318 aa19.88■□□□□ 0.77
ACTB-210ENST00000477812 OR13J1Q8NGT2 312 aa19.88■□□□□ 0.77
ACTB-210ENST00000477812 PTCD2Q8WV60 388 aaKnown RBP19.88■□□□□ 0.77
ACTB-210ENST00000477812 PEX13Q92968 403 aa19.88■□□□□ 0.77
ACTB-210ENST00000477812 BMFQ96LC9 184 aa19.88■□□□□ 0.77
ACTB-210ENST00000477812 PLEKHG4BQ96PX9 1271 aa19.88■□□□□ 0.77
ACTB-210ENST00000477812 MYOCQ99972 504 aa19.88■□□□□ 0.77
ACTB-210ENST00000477812 CDH19Q9H159 772 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms