RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 TFR2Q9UP52 801 aa21.73■■□□□ 1.07
COL9A3-211ENST00000477612 TTLL3Q9Y4R7 772 aa21.73■■□□□ 1.07
COL9A3-211ENST00000477612 URB1O60287 2271 aaKnown RBP21.72■■□□□ 1.07
COL9A3-211ENST00000477612 SOWAHDA6NJG2 315 aa21.72■■□□□ 1.07
COL9A3-211ENST00000477612 BTNL10A8MVZ5 291 aa21.72■■□□□ 1.07
COL9A3-211ENST00000477612 ANKRD66B4E2M5 251 aa21.72■■□□□ 1.07
COL9A3-211ENST00000477612 TNNT1P13805 278 aa21.72■■□□□ 1.07
COL9A3-211ENST00000477612 EPHB1P54762 984 aa21.72■■□□□ 1.07
COL9A3-211ENST00000477612 SLC14A2Q15849 920 aa21.72■■□□□ 1.07
COL9A3-211ENST00000477612 CDKN3Q16667 212 aa21.72■■□□□ 1.07
COL9A3-211ENST00000477612 DENND2CQ68D51 928 aa21.72■■□□□ 1.07
COL9A3-211ENST00000477612 OGFOD3Q6PK18 319 aa21.72■■□□□ 1.07
COL9A3-211ENST00000477612 SPOCD1Q6ZMY3 1216 aa21.72■■□□□ 1.07
COL9A3-211ENST00000477612 ZNF765Q7L2R6 523 aa21.72■■□□□ 1.07
COL9A3-211ENST00000477612 NAT6Q93015 286 aa21.72■■□□□ 1.07
COL9A3-211ENST00000477612 TADA1Q96BN2 335 aa21.72■■□□□ 1.07
COL9A3-211ENST00000477612 FRMD8Q9BZ67 464 aaPredicted RBP21.72■■□□□ 1.07
COL9A3-211ENST00000477612 ABCG8Q9H221 673 aa21.72■■□□□ 1.07
COL9A3-211ENST00000477612 GOLPH3Q9H4A6 298 aa21.72■■□□□ 1.07
COL9A3-211ENST00000477612 MRPL40Q9NQ50 206 aaKnown RBP21.72■■□□□ 1.07
COL9A3-211ENST00000477612 RCCD1A6NED2 376 aa21.71■■□□□ 1.07
COL9A3-211ENST00000477612 ZRANB2O95218 330 aaKnown RBP eCLIP21.71■■□□□ 1.07
COL9A3-211ENST00000477612 SOD1P00441 154 aa21.71■■□□□ 1.07
COL9A3-211ENST00000477612 TGM2P21980 687 aa21.71■■□□□ 1.07
COL9A3-211ENST00000477612 CD86P42081 329 aa21.71■■□□□ 1.07
COL9A3-211ENST00000477612 STC1P52823 247 aa21.71■■□□□ 1.07
COL9A3-211ENST00000477612 CDK3Q00526 305 aa21.71■■□□□ 1.07
COL9A3-211ENST00000477612 TEX44Q53QW1 395 aa21.71■■□□□ 1.07
COL9A3-211ENST00000477612 TFDP3Q5H9I0 405 aa21.71■■□□□ 1.07
COL9A3-211ENST00000477612 EFL1Q7Z2Z2 1120 aaKnown RBP21.71■■□□□ 1.07
COL9A3-211ENST00000477612 HEATR4Q86WZ0 1026 aa21.71■■□□□ 1.07
COL9A3-211ENST00000477612 RCOR2Q8IZ40 523 aa21.71■■□□□ 1.07
COL9A3-211ENST00000477612 NRSN1Q8IZ57 195 aa21.71■■□□□ 1.07
COL9A3-211ENST00000477612 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.71■■□□□ 1.07
COL9A3-211ENST00000477612 ARL10Q8N8L6 244 aa21.71■■□□□ 1.07
COL9A3-211ENST00000477612 NXPE2Q96DL1 559 aa21.71■■□□□ 1.07
COL9A3-211ENST00000477612 IMP4Q96G21 291 aaKnown RBP21.71■■□□□ 1.07
COL9A3-211ENST00000477612 SLC25A51Q9H1U9 297 aa21.71■■□□□ 1.07
COL9A3-211ENST00000477612 PADI4Q9UM07 663 aa21.71■■□□□ 1.07
COL9A3-211ENST00000477612 DOLKQ9UPQ8 538 aa21.71■■□□□ 1.07
COL9A3-211ENST00000477612 PKD1L2Q7Z442 2459 aa21.71■■□□□ 1.07
COL9A3-211ENST00000477612 ADAMTS20P59510 1910 aa21.7■■□□□ 1.07
COL9A3-211ENST00000477612 ZFHX4Q86UP3 3567 aa21.7■■□□□ 1.06
COL9A3-211ENST00000477612 A0A0U1RQS6 177 aa21.7■■□□□ 1.06
COL9A3-211ENST00000477612 PRSS38A1L453 326 aa21.7■■□□□ 1.06
COL9A3-211ENST00000477612 CPED1A4D0V7 1026 aa21.7■■□□□ 1.06
COL9A3-211ENST00000477612 CST8O60676 142 aa21.7■■□□□ 1.06
COL9A3-211ENST00000477612 CEACAM5P06731 702 aa21.7■■□□□ 1.06
COL9A3-211ENST00000477612 PYGLP06737 847 aa21.7■■□□□ 1.06
COL9A3-211ENST00000477612 ADCY2Q08462 1091 aa21.7■■□□□ 1.06
COL9A3-211ENST00000477612 PRKD1Q15139 912 aaPredicted RBP21.7■■□□□ 1.06
COL9A3-211ENST00000477612 PERM1Q5SV97 790 aa21.7■■□□□ 1.06
COL9A3-211ENST00000477612 RAD9BQ6WBX8 426 aa21.7■■□□□ 1.06
COL9A3-211ENST00000477612 RFLNAQ6ZTI6 216 aa21.7■■□□□ 1.06
COL9A3-211ENST00000477612 NT5DC3Q86UY8 548 aa21.7■■□□□ 1.06
COL9A3-211ENST00000477612 GPR156Q8NFN8 814 aa21.7■■□□□ 1.06
COL9A3-211ENST00000477612 EXD1Q8NHP7 514 aa21.7■■□□□ 1.06
COL9A3-211ENST00000477612 MAPK15Q8TD08 544 aa21.7■■□□□ 1.06
COL9A3-211ENST00000477612 TRIB3Q96RU7 358 aa21.7■■□□□ 1.06
COL9A3-211ENST00000477612 ABCG4Q9H172 646 aa21.7■■□□□ 1.06
COL9A3-211ENST00000477612 CYP4F12Q9HCS2 524 aa21.7■■□□□ 1.06
COL9A3-211ENST00000477612 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.7■■□□□ 1.06
COL9A3-211ENST00000477612 REXO2Q9Y3B8 237 aaKnown RBP21.7■■□□□ 1.06
COL9A3-211ENST00000477612 UNC13CQ8NB66 2214 aa21.7■■□□□ 1.06
COL9A3-211ENST00000477612 DSPP15924 2871 aaKnown RBP21.7■■□□□ 1.06
COL9A3-211ENST00000477612 CELSR3Q9NYQ7 3312 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 hCG_1818297A0A087WSY0 165 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 PJA2O43164 708 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 CLDN7O95471 211 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 FUCA1P04066 466 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 DYNLT1P63172 113 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 PPP2R5EQ16537 467 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 QPCTQ16769 361 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 RAET1GQ6H3X3 334 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 ADAMTSL4Q6UY14 1074 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 LPCAT1Q8NF37 534 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 OR6C4Q8NGE1 309 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 WDR48Q8TAF3 677 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 GRAMD1AQ96CP6 724 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 AP2M1Q96CW1 435 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 SCARF2Q96GP6 870 aaPredicted RBP21.69■■□□□ 1.06
COL9A3-211ENST00000477612 TEKT5Q96M29 485 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 DEPDC7Q96QD5 511 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 MLPHQ9BV36 600 aaPredicted RBP21.69■■□□□ 1.06
COL9A3-211ENST00000477612 ADGRE3Q9BY15 652 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 TMEM168Q9H0V1 697 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 TRNAU1APQ9NX07 287 aaKnown RBP21.69■■□□□ 1.06
COL9A3-211ENST00000477612 GPR34Q9UPC5 381 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 SLC17A4Q9Y2C5 497 aa21.69■■□□□ 1.06
COL9A3-211ENST00000477612 RGSL1A5PLK6 1076 aa21.68■■□□□ 1.06
COL9A3-211ENST00000477612 PECAM1P16284 738 aaPredicted RBP21.68■■□□□ 1.06
COL9A3-211ENST00000477612 GPR1P46091 355 aa21.68■■□□□ 1.06
COL9A3-211ENST00000477612 MARCKSL1P49006 195 aa21.68■■□□□ 1.06
COL9A3-211ENST00000477612 DAAM2Q86T65 1068 aa21.68■■□□□ 1.06
COL9A3-211ENST00000477612 GPBAR1Q8TDU6 330 aa21.68■■□□□ 1.06
COL9A3-211ENST00000477612 TFB1MQ8WVM0 346 aaKnown RBP21.68■■□□□ 1.06
COL9A3-211ENST00000477612 KRT35Q92764 455 aa21.68■■□□□ 1.06
COL9A3-211ENST00000477612 RBM41Q96IZ5 413 aaKnown RBP21.68■■□□□ 1.06
COL9A3-211ENST00000477612 AGAP3Q96P47 875 aa21.68■■□□□ 1.06
COL9A3-211ENST00000477612 CEP41Q9BYV8 373 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms