RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-231ENST00000477334 PLA2G2AP14555 144 aa4.28□□□□□ -1.72
RBM39-231ENST00000477334 MAOAP21397 527 aa4.28□□□□□ -1.72
RBM39-231ENST00000477334 TNFRSF8P28908 595 aa4.28□□□□□ -1.72
RBM39-231ENST00000477334 MYBPHQ13203 477 aa4.28□□□□□ -1.72
RBM39-231ENST00000477334 AMZ1Q400G9 498 aa4.28□□□□□ -1.72
RBM39-231ENST00000477334 PPP6R3Q5H9R7 873 aaPredicted RBP4.28□□□□□ -1.72
RBM39-231ENST00000477334 GGNBP1Q5YKI7 109 aa4.28□□□□□ -1.72
RBM39-231ENST00000477334 PLEKHA7Q6IQ23 1121 aa4.28□□□□□ -1.72
RBM39-231ENST00000477334 METTL2BQ6P1Q9 378 aaKnown RBP4.28□□□□□ -1.72
RBM39-231ENST00000477334 PDXDC1Q6P996 788 aa4.28□□□□□ -1.72
RBM39-231ENST00000477334 SPATA2LQ8IUW3 424 aaPredicted RBP4.28□□□□□ -1.72
RBM39-231ENST00000477334 FOXRED2Q8IWF2 684 aa4.28□□□□□ -1.72
RBM39-231ENST00000477334 CLEC18CQ8NCF0 446 aa4.28□□□□□ -1.72
RBM39-231ENST00000477334 IGSF8Q969P0 613 aa4.28□□□□□ -1.72
RBM39-231ENST00000477334 ARHGEF26Q96DR7 871 aa4.28□□□□□ -1.72
RBM39-231ENST00000477334 MTBPQ96DY7 904 aa4.28□□□□□ -1.72
RBM39-231ENST00000477334 METTL2AQ96IZ6 378 aaKnown RBP4.28□□□□□ -1.72
RBM39-231ENST00000477334 THOC3Q96J01 351 aaKnown RBP4.28□□□□□ -1.72
RBM39-231ENST00000477334 PPP1R13BQ96KQ4 1090 aa4.28□□□□□ -1.72
RBM39-231ENST00000477334 FIZ1Q96SL8 496 aa4.28□□□□□ -1.72
RBM39-231ENST00000477334 PCGF1Q9BSM1 259 aa4.28□□□□□ -1.72
RBM39-231ENST00000477334 PLEKHA5Q9HAU0 1116 aa4.28□□□□□ -1.72
RBM39-231ENST00000477334 HCFC1R1Q9NWW0 138 aa4.28□□□□□ -1.72
RBM39-231ENST00000477334 TTC7AQ9ULT0 858 aaPredicted RBP4.28□□□□□ -1.72
RBM39-231ENST00000477334 ATXN2Q99700 1313 aaKnown RBP4.27□□□□□ -1.73
RBM39-231ENST00000477334 C1orf226A1L170 272 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 AP3D1O14617 1153 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 PLRG1O43660 514 aaKnown RBP4.27□□□□□ -1.73
RBM39-231ENST00000477334 DOK2O60496 412 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 PTP4A3O75365 173 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 SLC25A12O75746 678 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 FCGR1AP12314 374 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 DSCR9P59020 149 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 NIPAL4Q0D2K0 466 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 GRSF1Q12849 480 aaKnown RBP eCLIP4.27□□□□□ -1.73
RBM39-231ENST00000477334 CDONQ4KMG0 1287 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 HYIQ5T013 277 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 GKAP1Q5VSY0 366 aaPredicted RBP4.27□□□□□ -1.73
RBM39-231ENST00000477334 SIGIRRQ6IA17 410 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 WDR73Q6P4I2 378 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 KLHL35Q6PF15 583 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 RHBDF2Q6PJF5 856 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 CRELD2Q6UXH1 353 aaPredicted RBP4.27□□□□□ -1.73
RBM39-231ENST00000477334 DLK2Q6UY11 383 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 DPPA4Q7L190 304 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 WDTC1Q8N5D0 677 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 RRNAD1Q96FB5 475 aaKnown RBP4.27□□□□□ -1.73
RBM39-231ENST00000477334 SCMH1Q96GD3 660 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 MED30Q96HR3 178 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 MARK4Q96L34 752 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 C1orf74Q96LT6 269 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 HARBI1Q96MB7 349 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 CMTM3Q96MX0 182 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 C17orf75Q9HAS0 396 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 MMP25Q9NPA2 562 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 LAS1LQ9Y4W2 734 aaKnown RBP4.27□□□□□ -1.73
RBM39-231ENST00000477334 MAU2Q9Y6X3 613 aa4.27□□□□□ -1.73
RBM39-231ENST00000477334 IGKV2D-30A0A075B6S6 120 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 FSD2A1L4K1 749 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 MYO1GB0I1T2 1018 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 BTBD18B2RXH4 712 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 IGHV4-30-4P0DP06 118 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 DDX5P17844 614 aaKnown RBP4.26□□□□□ -1.73
RBM39-231ENST00000477334 HADHAP40939 763 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 PIK3CAP42336 1068 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 GALCP54803 685 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 EIF5P55010 431 aaKnown RBP4.26□□□□□ -1.73
RBM39-231ENST00000477334 ZXDBP98169 803 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 CTF1Q16619 201 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 KRT24Q2M2I5 525 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 ZNF585BQ52M93 769 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 SETMARQ53H47 684 aaPredicted RBP4.26□□□□□ -1.73
RBM39-231ENST00000477334 DUS1LQ6P1R4 473 aaKnown RBP4.26□□□□□ -1.73
RBM39-231ENST00000477334 CREB3L2Q70SY1 520 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 TTC39CQ8N584 583 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 SCFD2Q8WU76 684 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 POMGNT1Q8WZA1 660 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 C3orf30Q96M34 536 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 TIGD1Q96MW7 591 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 OR1F2PQ96R84 312 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 ACOX2Q99424 681 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 TM6SF1Q9BZW5 370 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 PDZD7Q9H5P4 517 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 SH2D4AQ9H788 454 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 KAT14Q9H8E8 782 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 TBC1D22BQ9NU19 505 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 ACSS1Q9NUB1 689 aaPredicted RBP4.26□□□□□ -1.73
RBM39-231ENST00000477334 R3HDM2Q9Y2K5 976 aaKnown RBP4.26□□□□□ -1.73
RBM39-231ENST00000477334 LYVE1Q9Y5Y7 322 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 NFS1Q9Y697 457 aa4.26□□□□□ -1.73
RBM39-231ENST00000477334 SRRM3A6NNA2 597 aaPredicted RBP4.25□□□□□ -1.73
RBM39-231ENST00000477334 PTGES3LE9PB15 166 aa4.25□□□□□ -1.73
RBM39-231ENST00000477334 H3BQ06 376 aaPredicted RBP4.25□□□□□ -1.73
RBM39-231ENST00000477334 SLC28A2O43868 658 aa4.25□□□□□ -1.73
RBM39-231ENST00000477334 NDUFS3O75489 264 aa4.25□□□□□ -1.73
RBM39-231ENST00000477334 CLDN14O95500 239 aa4.25□□□□□ -1.73
RBM39-231ENST00000477334 ZBTB11O95625 1053 aaPredicted RBP4.25□□□□□ -1.73
RBM39-231ENST00000477334 EGFP01133 1207 aa4.25□□□□□ -1.73
RBM39-231ENST00000477334 CDH2P19022 906 aaPredicted RBP4.25□□□□□ -1.73
RBM39-231ENST00000477334 BDKRB2P30411 391 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms