RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 DRC3Q9H069 523 aa23.01■■□□□ 1.27
CCDC7-206ENST00000476558 STN1Q9H668 368 aaKnown RBP23.01■■□□□ 1.27
CCDC7-206ENST00000476558 ATP13A3Q9H7F0 1226 aa23.01■■□□□ 1.27
CCDC7-206ENST00000476558 TXLNGQ9NUQ3 528 aa23.01■■□□□ 1.27
CCDC7-206ENST00000476558 YBX2Q9Y2T7 364 aaKnown RBP23.01■■□□□ 1.27
CCDC7-206ENST00000476558 PDE4DIPQ5VU43 2346 aa23.01■■□□□ 1.27
CCDC7-206ENST00000476558 A0A0J9YYE9 177 aa23.01■■□□□ 1.27
CCDC7-206ENST00000476558 A0A0U1RQS6 177 aa23.01■■□□□ 1.27
CCDC7-206ENST00000476558 TRBC1P01850 177 aa23.01■■□□□ 1.27
CCDC7-206ENST00000476558 ATP5BP06576 529 aaKnown RBP23.01■■□□□ 1.27
CCDC7-206ENST00000476558 PABPC1P11940 636 aaKnown RBP23.01■■□□□ 1.27
CCDC7-206ENST00000476558 BMP1P13497 986 aa23.01■■□□□ 1.27
CCDC7-206ENST00000476558 CDKN1CP49918 316 aaPredicted RBP23.01■■□□□ 1.27
CCDC7-206ENST00000476558 PFKPQ01813 784 aa23.01■■□□□ 1.27
CCDC7-206ENST00000476558 DMC1Q14565 340 aa23.01■■□□□ 1.27
CCDC7-206ENST00000476558 CBX2Q14781 532 aaPredicted RBP23.01■■□□□ 1.27
CCDC7-206ENST00000476558 SHHQ15465 462 aa23.01■■□□□ 1.27
CCDC7-206ENST00000476558 LY6G5CQ5SRR4 150 aa23.01■■□□□ 1.27
CCDC7-206ENST00000476558 MAVSQ7Z434 540 aa23.01■■□□□ 1.27
CCDC7-206ENST00000476558 PIM3Q86V86 326 aa23.01■■□□□ 1.27
CCDC7-206ENST00000476558 UNKQ9C0B0 810 aaKnown RBP23.01■■□□□ 1.27
CCDC7-206ENST00000476558 TLE6Q9H808 572 aa23.01■■□□□ 1.27
CCDC7-206ENST00000476558 MED16Q9Y2X0 877 aa23.01■■□□□ 1.27
CCDC7-206ENST00000476558 ALPIP09923 528 aa23■■□□□ 1.27
CCDC7-206ENST00000476558 CTPS1P17812 591 aa23■■□□□ 1.27
CCDC7-206ENST00000476558 WEE1P30291 646 aa23■■□□□ 1.27
CCDC7-206ENST00000476558 MC4RP32245 332 aa23■■□□□ 1.27
CCDC7-206ENST00000476558 DNAJB13P59910 316 aa23■■□□□ 1.27
CCDC7-206ENST00000476558 SNRPD1P62314 119 aaKnown RBP23■■□□□ 1.27
CCDC7-206ENST00000476558 PSAPL1Q6NUJ1 521 aa23■■□□□ 1.27
CCDC7-206ENST00000476558 C22orf39Q6P5X5 142 aa23■■□□□ 1.27
CCDC7-206ENST00000476558 ELMSAN1Q6PJG2 1045 aa23■■□□□ 1.27
CCDC7-206ENST00000476558 LYSMD3Q7Z3D4 306 aa23■■□□□ 1.27
CCDC7-206ENST00000476558 ADIPOR2Q86V24 386 aa23■■□□□ 1.27
CCDC7-206ENST00000476558 DDX51Q8N8A6 666 aaKnown RBP eCLIP23■■□□□ 1.27
CCDC7-206ENST00000476558 ITFG1Q8TB96 612 aa23■■□□□ 1.27
CCDC7-206ENST00000476558 ING5Q8WYH8 240 aa23■■□□□ 1.27
CCDC7-206ENST00000476558 LRRC3BQ96PB8 259 aa23■■□□□ 1.27
CCDC7-206ENST00000476558 CEP44Q9C0F1 390 aa23■■□□□ 1.27
CCDC7-206ENST00000476558 BPIFA1Q9NP55 256 aa23■■□□□ 1.27
CCDC7-206ENST00000476558 HAO1Q9UJM8 370 aa23■■□□□ 1.27
CCDC7-206ENST00000476558 MRPS23Q9Y3D9 190 aaKnown RBP23■■□□□ 1.27
CCDC7-206ENST00000476558 MTF2Q9Y483 593 aaPredicted RBP23■■□□□ 1.27
CCDC7-206ENST00000476558 NUP210Q8TEM1 1887 aaPredicted RBP23■■□□□ 1.27
CCDC7-206ENST00000476558 CFAP73A6NFT4 308 aa22.99■■□□□ 1.27
CCDC7-206ENST00000476558 SLC4A1P02730 911 aa22.99■■□□□ 1.27
CCDC7-206ENST00000476558 RBP1P09455 135 aa22.99■■□□□ 1.27
CCDC7-206ENST00000476558 TUBB3Q13509 450 aa22.99■■□□□ 1.27
CCDC7-206ENST00000476558 MYLK3Q32MK0 819 aa22.99■■□□□ 1.27
CCDC7-206ENST00000476558 SETMARQ53H47 684 aaPredicted RBP22.99■■□□□ 1.27
CCDC7-206ENST00000476558 ALYREFQ86V81 257 aaKnown RBP22.99■■□□□ 1.27
CCDC7-206ENST00000476558 KIAA1958Q8N8K9 716 aa22.99■■□□□ 1.27
CCDC7-206ENST00000476558 TXNDC5Q8NBS9 432 aaKnown RBP22.99■■□□□ 1.27
CCDC7-206ENST00000476558 PRR11Q96HE9 360 aaPredicted RBP22.99■■□□□ 1.27
CCDC7-206ENST00000476558 BIRC8Q96P09 236 aa22.99■■□□□ 1.27
CCDC7-206ENST00000476558 TUBGCP5Q96RT8 1024 aa22.99■■□□□ 1.27
CCDC7-206ENST00000476558 EBF4Q9BQW3 602 aa22.99■■□□□ 1.27
CCDC7-206ENST00000476558 ARHGEF3Q9NR81 526 aa22.99■■□□□ 1.27
CCDC7-206ENST00000476558 VPS9D1Q9Y2B5 631 aa22.99■■□□□ 1.27
CCDC7-206ENST00000476558 WNT6Q9Y6F9 365 aa22.99■■□□□ 1.27
CCDC7-206ENST00000476558 SCN8AQ9UQD0 1980 aa22.99■■□□□ 1.27
CCDC7-206ENST00000476558 FCHO1O14526 889 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 HSPA4LO95757 839 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 ATP5F1P24539 256 aaPredicted RBP22.98■■□□□ 1.27
CCDC7-206ENST00000476558 NAGLUP54802 743 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 ZBTB16Q05516 673 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 SULT2A1Q06520 285 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 KLC3Q6P597 504 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 ISCA2Q86U28 154 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 ZSWIM9Q86XI8 627 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 ECHDC3Q96DC8 303 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 SLC2A11Q9BYW1 496 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 CPEB1Q9BZB8 566 aaKnown RBP22.98■■□□□ 1.27
CCDC7-206ENST00000476558 GPR63Q9BZJ6 419 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 NMUR2Q9GZQ4 415 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 FAM96AQ9H5X1 160 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 DNAJC28Q9NX36 388 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 FBXO10Q9UK96 956 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 PKP3Q9Y446 797 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 SLC9A3R1O14745 358 aaPredicted RBP22.98■■□□□ 1.27
CCDC7-206ENST00000476558 NDUFS3O75489 264 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 RASSF9O75901 435 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 CD9P21926 228 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 SERPINA4P29622 427 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 HNF1BP35680 557 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 TTPAP49638 278 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 ECT2LQ008S8 904 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 KCNC3Q14003 757 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 RCN2Q14257 317 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 TTC7BQ86TV6 843 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 LSMEM2Q8N112 164 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 PCDH20Q8N6Y1 951 aaKnown RBP22.98■■□□□ 1.27
CCDC7-206ENST00000476558 ZNF781Q8N8C0 355 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 SMG7Q92540 1137 aaKnown RBP22.98■■□□□ 1.27
CCDC7-206ENST00000476558 MOCOSQ96EN8 888 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 LYSMD1Q96S90 227 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 CDH19Q9H159 772 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 HECAQ9UBI9 543 aaPredicted RBP22.98■■□□□ 1.27
CCDC7-206ENST00000476558 SLC25A13Q9UJS0 675 aa22.98■■□□□ 1.27
CCDC7-206ENST00000476558 TRIM33Q9UPN9 1127 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms