RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 COLGALT2Q8IYK4 626 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 SEMA4DQ92854 862 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 GAL3ST3Q96A11 431 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 ZNF597Q96LX8 424 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 VPS35Q96QK1 796 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 NFKBIZQ9BYH8 718 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 UNKQ9C0B0 810 aaKnown RBP11.53□□□□□ -0.56
U2AF1-209ENST00000475639 NMRAL1Q9HBL8 299 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 ANKEF1Q9NU02 776 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 MCUBQ9NWR8 336 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 SRP68Q9UHB9 627 aaKnown RBP11.53□□□□□ -0.56
U2AF1-209ENST00000475639 FBXO10Q9UK96 956 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 MAFFQ9ULX9 164 aa11.53□□□□□ -0.56
U2AF1-209ENST00000475639 PPIEQ9UNP9 301 aaKnown RBP11.53□□□□□ -0.56
U2AF1-209ENST00000475639 PRKAR1AP10644 381 aa11.52□□□□□ -0.56
U2AF1-209ENST00000475639 MS4A2Q01362 244 aa11.52□□□□□ -0.56
U2AF1-209ENST00000475639 VWA5B1Q5TIE3 1220 aa11.52□□□□□ -0.56
U2AF1-209ENST00000475639 ANKRD26P1Q6NSI1 321 aa11.52□□□□□ -0.56
U2AF1-209ENST00000475639 RNF44Q7L0R7 432 aa11.52□□□□□ -0.56
U2AF1-209ENST00000475639 ZSCAN18Q8TBC5 510 aaPredicted RBP11.52□□□□□ -0.56
U2AF1-209ENST00000475639 HPS1Q92902 700 aa11.52□□□□□ -0.56
U2AF1-209ENST00000475639 SPATA5L1Q9BVQ7 753 aa11.52□□□□□ -0.56
U2AF1-209ENST00000475639 ZNF518BQ9C0D4 1074 aa11.52□□□□□ -0.56
U2AF1-209ENST00000475639 QTRT2Q9H974 415 aaKnown RBP11.52□□□□□ -0.56
U2AF1-209ENST00000475639 PNPLA3Q9NST1 481 aa11.52□□□□□ -0.56
U2AF1-209ENST00000475639 CLN6Q9NWW5 311 aa11.52□□□□□ -0.56
U2AF1-209ENST00000475639 CCDC167Q9P0B6 97 aa11.52□□□□□ -0.56
U2AF1-209ENST00000475639 RAPGEFL1Q9UHV5 662 aa11.52□□□□□ -0.56
U2AF1-209ENST00000475639 TAF1P21675 1872 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 A8MU76 341 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 DCXO43602 365 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 RFPL1O75677 317 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 RNASEH2AO75792 299 aaKnown RBP11.52□□□□□ -0.57
U2AF1-209ENST00000475639 COX4I1P13073 169 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 GRM5P41594 1212 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 ELK3P41970 407 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 IDH3AP50213 366 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 ATN1P54259 1190 aaPredicted RBP11.52□□□□□ -0.57
U2AF1-209ENST00000475639 AP1S1P61966 158 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 GNA12Q03113 381 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 GRSF1Q12849 480 aaKnown RBP eCLIP11.52□□□□□ -0.57
U2AF1-209ENST00000475639 SAMD3Q8N6K7 520 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 EMC1Q8N766 993 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 LEMD2Q8NC56 503 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 FICDQ9BVA6 458 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 MID1IP1Q9NPA3 183 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 TMEM216Q9P0N5 145 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 NUDT5Q9UKK9 219 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 G3V2T6 193 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 PCDH8O95206 1070 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 CATP04040 527 aaKnown RBP11.52□□□□□ -0.57
U2AF1-209ENST00000475639 ITGAVP06756 1048 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 HPCAL1P37235 193 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 ZNHIT3Q15649 155 aaPredicted RBP11.52□□□□□ -0.57
U2AF1-209ENST00000475639 PTAR1Q7Z6K3 402 aaPredicted RBP11.52□□□□□ -0.57
U2AF1-209ENST00000475639 SLC9A9Q8IVB4 645 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 DAW1Q8N136 415 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 BHLHE22Q8NFJ8 381 aaPredicted RBP11.52□□□□□ -0.57
U2AF1-209ENST00000475639 HM13Q8TCT9 377 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 MYDGFQ969H8 173 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 CRELD1Q96HD1 420 aa11.52□□□□□ -0.57
U2AF1-209ENST00000475639 CLK4Q9HAZ1 481 aaKnown RBP11.52□□□□□ -0.57
U2AF1-209ENST00000475639 CNOT11Q9UKZ1 510 aaKnown RBP11.52□□□□□ -0.57
U2AF1-209ENST00000475639 H7C4K7 107 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 MSH4O15457 936 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 ERBB2P04626 1255 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 CCR1P32246 355 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 CDH17Q12864 832 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 EIF2S3LQ2VIR3 472 aaKnown RBP11.51□□□□□ -0.57
U2AF1-209ENST00000475639 GNASQ5JWF2 1037 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 C1orf186Q6ZWK4 172 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 SNX32Q86XE0 403 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 OFCC1Q8IZS5 231 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 PSMA8Q8TAA3 256 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 RASSF5Q8WWW0 418 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 MBOAT7Q96N66 472 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 SLC4A9Q96Q91 983 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 DOK1Q99704 481 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 NAA50Q9GZZ1 169 aaKnown RBP11.51□□□□□ -0.57
U2AF1-209ENST00000475639 COQ10BQ9H8M1 238 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 AASDHPPTQ9NRN7 309 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 RASSF1Q9NS23 344 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 DPP7Q9UHL4 492 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 NHSQ6T4R5 1651 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 CYP3A7-CYP3A51PA0A087WV96 503 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 FAM240BA0A1B0GVZ2 78 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 OGTO15294 1046 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 RGS14O43566 566 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 ZBTB14O43829 449 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 C1QAP02745 245 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 CYP3A7P24462 503 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 TLX1P31314 330 aaPredicted RBP11.51□□□□□ -0.57
U2AF1-209ENST00000475639 RENBPP51606 427 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 GALNT2Q10471 571 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 CUL2Q13617 745 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 TOMM20Q15388 145 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 CCSAPQ6IQ19 270 aaPredicted RBP11.51□□□□□ -0.57
U2AF1-209ENST00000475639 POLNQ7Z5Q5 900 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 FBXO33Q7Z6M2 555 aa11.51□□□□□ -0.57
U2AF1-209ENST00000475639 SYT12Q8IV01 421 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms